RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 GLG1Q92896 1179 aa20.11■□□□□ 0.81
TRAPPC3-209ENST00000616395 TCF25Q9BQ70 676 aa20.11■□□□□ 0.81
TRAPPC3-209ENST00000616395 TYW1Q9NV66 732 aaKnown RBP20.11■□□□□ 0.81
TRAPPC3-209ENST00000616395 KAT6AQ92794 2004 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 PALM3A6NDB9 673 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 TRAF1Q13077 416 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 IFIT1BQ5T764 474 aaKnown RBP20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 FAM102BQ5T8I3 360 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 CWF19L1Q69YN2 538 aaKnown RBP20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 DGLUCYQ7Z3D6 616 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 GIMAP8Q8ND71 665 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 FLCNQ8NFG4 579 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 SEPT1Q8WYJ6 367 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 UBAC1Q9BSL1 405 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 ENTPD7Q9NQZ7 604 aa20.1■□□□□ 0.81
TRAPPC3-209ENST00000616395 ZNF292O60281 2723 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 PI15O43692 258 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 MGEA5O60502 916 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 ATP9AO75110 1047 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 KRT37O76014 449 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 HSP90AA1P07900 732 aaKnown RBP20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 ARP10275 920 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 INSRRP14616 1297 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 HSPA4P34932 840 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 NFX1Q12986 1120 aaKnown RBP20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 TPRNQ4KMQ1 711 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 CES5AQ6NT32 575 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 MRPS27Q92552 414 aaKnown RBP20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 NECTIN4Q96NY8 510 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 CELF4Q9BZC1 486 aaKnown RBP20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 ADAM7Q9H2U9 754 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 SMARCAD1Q9H4L7 1026 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 LZTS1Q9Y250 596 aa20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC3-209ENST00000616395 RRN3P2A6NIE6 340 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 CYP21A2P08686 494 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 KCNA2P16389 499 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 PCNX4Q63HM2 1172 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 NLRX1Q86UT6 975 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 CASP10Q92851 521 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 LSG1Q9H089 658 aaKnown RBP20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 RIOX1Q9H6W3 641 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 CWH43Q9H720 699 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 LIMD1Q9UGP4 676 aa20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 PUF60Q9UHX1 559 aaKnown RBP20.08■□□□□ 0.81
TRAPPC3-209ENST00000616395 WEE2P0C1S8 567 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 PSMA5P28066 241 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 PLCB3Q01970 1234 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 ITIH3Q06033 890 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 KRT32Q14532 448 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 ANGPT1Q15389 498 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 CCDC105Q8IYK2 499 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 KCNG4Q8TDN1 519 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 TRAPPC12Q8WVT3 735 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 ERVK-5Q9HDB9 667 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 NGRNQ9NPE2 291 aaKnown RBP20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 RBM8AQ9Y5S9 174 aaKnown RBP20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 HCFC2Q9Y5Z7 792 aa20.07■□□□□ 0.8
TRAPPC3-209ENST00000616395 PNMA6FA0A0J9YX94 578 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 CYTH3O43739 400 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 FGFR1P11362 822 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 LAG3P18627 525 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 KRT76Q01546 638 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 SEC23AQ15436 765 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 XRRA1Q6P2D8 792 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 KIAA2013Q8IYS2 634 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 ZDHHC14Q8IZN3 488 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 TDRD5Q8NAT2 981 aaKnown RBP20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 ADAM2Q99965 735 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 PCDHA2Q9Y5H9 948 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 FNDC1Q4ZHG4 1894 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 KDM3AQ9Y4C1 1321 aa20.06■□□□□ 0.8
TRAPPC3-209ENST00000616395 DNAH14Q0VDD8 3507 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 DENND3A2RUS2 1198 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 NPR3P17342 541 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 AOC1P19801 751 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 MTHFRP42898 656 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 USP17L6PQ6QN14 398 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 SLC24A5Q71RS6 500 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 TMC7Q7Z402 723 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 PCYT2Q99447 389 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 KRT23Q9C075 422 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 RGS18Q9NS28 235 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 C1orf112Q9NSG2 853 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 PKD2L1Q9P0L9 805 aa20.05■□□□□ 0.8
TRAPPC3-209ENST00000616395 MYO10Q9HD67 2058 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 C9IYK1 514 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 GRM4Q14833 912 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 DTWD2Q8NBA8 298 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 SMARCC2Q8TAQ2 1214 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 MAP4K1Q92918 833 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 GPRASP2Q96D09 838 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 GINS2Q9Y248 185 aa20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 NOC2LQ9Y3T9 749 aaKnown RBP20.04■□□□□ 0.8
TRAPPC3-209ENST00000616395 K7ELQ4 463 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC3-209ENST00000616395 LMNAP02545 664 aaKnown RBP20.03■□□□□ 0.8
TRAPPC3-209ENST00000616395 ITGB5P18084 799 aa20.03■□□□□ 0.8
TRAPPC3-209ENST00000616395 PBX3P40426 434 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms