RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ANKRD13CQ8N6S4 541 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PPP1R13LQ8WUF5 828 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZBTB10Q96DT7 871 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 C12orf42Q96LP6 360 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PANX2Q96RD6 677 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 LSM14BQ9BX40 385 aaKnown RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 TBC1D22BQ9NU19 505 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 GINM1Q9NU53 330 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 SEPT9Q9UHD8 586 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 ADGRG1Q9Y653 693 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 BRCA2P51587 3418 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PITPNM2Q9BZ72 1349 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 LRRC53A6NM62 1247 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 WDR64B1ANS9 1081 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZSCAN12O43309 604 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 LRRN2O75325 713 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 FGFR1OPO95684 399 aaKnown RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 CCDC175P0C221 793 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 HOXD11P31277 338 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 ACTR2P61160 394 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 KCNMA1Q12791 1236 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 STXBP2Q15833 593 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ARHGAP29Q52LW3 1261 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZNF569Q5MCW4 686 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 NOL9Q5SY16 702 aaKnown RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 B3GNT9Q6UX72 402 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 USP50Q70EL3 339 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 ANO5Q75V66 913 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZNF720Q7Z2F6 126 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 TRIM50Q86XT4 487 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 COPS5Q92905 334 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PORCNQ9H237 461 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 RBPJLQ9UBG7 517 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ARMCX3Q9UH62 379 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZNF215Q9UL58 517 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 ADAMTS5Q9UNA0 930 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PCDHA10Q9Y5I2 948 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 EPN1Q9Y6I3 576 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 DUSP10Q9Y6W6 482 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 FRMD3A2A2Y4 597 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 SOWAHBA6NEL2 793 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 EXOC3O60645 756 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 BCRP11274 1271 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 KCNA2P16389 499 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PPP1R2P41236 205 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PSMC5P62195 406 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ETF1P62495 437 aaKnown RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 PPATQ06203 517 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 MAPK7Q13164 816 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 RAPGEF1Q13905 1077 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 TDRD12Q587J7 1177 aaKnown RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 TRIM65Q6PJ69 517 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 CYP26C1Q6V0L0 522 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ARMC9Q7Z3E5 817 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 FBXO16Q8IX29 292 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 MYRIPQ8NFW9 859 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 NEK11Q8NG66 645 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 TMEM143Q96AN5 459 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 SAAL1Q96ER3 474 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 DRC1Q96MC2 740 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 INPP4AQ96PE3 977 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 CBWD1Q9BRT8 395 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 EPC1Q9H2F5 836 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 DEF6Q9H4E7 631 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 JPH1Q9HDC5 661 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZNHIT6Q9NWK9 470 aaKnown RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 SLC9A2Q9UBY0 812 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 CAPN11Q9UMQ6 739 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 PAXBP1Q9Y5B6 917 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ATAD5Q96QE3 1844 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ITIH6Q6UXX5 1313 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 A0A0G2JLL6 359 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 MACROD2A1Z1Q3 448 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 SPDYE5A6NIY4 337 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 ENC1O14682 589 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CALUO43852 315 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 CLSTN1O94985 981 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 KIF20AO95235 890 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 NDUFA10O95299 355 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CELF2O95319 508 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 FDX1P10109 184 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 XRCC5P13010 732 aaKnown RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 DNA2P51530 1060 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PTPROQ16827 1216 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 SH3D19Q5HYK7 790 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PRRT2Q7Z6L0 340 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 KIAA1328Q86T90 577 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 TMTC1Q8IUR5 882 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 ZNF397Q8NF99 534 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 CCDC127Q96BQ5 260 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 CCDC42Q96M95 316 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 FIZ1Q96SL8 496 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PPP1R16BQ96T49 567 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.77□□□□□ -1.81
LIG4-205ENST00000614526 GBP3Q9H0R5 595 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 NHEJ1Q9H9Q4 299 aaPredicted RBP3.77□□□□□ -1.81
LIG4-205ENST00000614526 SUGCTQ9HAC7 445 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 MLXIPQ9HAP2 919 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 PDGFCQ9NRA1 345 aa3.77□□□□□ -1.81
LIG4-205ENST00000614526 LARSQ9P2J5 1176 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms