RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 CKAP2LQ8IYA6 745 aa13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 BANK1Q8NDB2 785 aa13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 CLP1Q92989 425 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 ZNF689Q96CS4 500 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 NSUN3Q9H649 340 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 FAM50BQ9Y247 325 aa13.77□□□□□ -0.21
PDLIM2-218ENST00000614502 DHX15O43143 795 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 GPR37L1O60883 481 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 DGKIO75912 1065 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 CCNE2O96020 404 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 CD52P31358 61 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 BMPR1AP36894 532 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 USP11P51784 963 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 TCEAL5Q5H9L2 206 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 PTCRAQ6ISU1 281 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 SWSAP1Q6NVH7 229 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 CCDC60Q8IWA6 550 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 GJD3Q8N144 294 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 TRAPPC12Q8WVT3 735 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 PHKBQ93100 1093 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 FAM167AQ96KS9 214 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 AGO3Q9H9G7 860 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 LRFN2Q9ULH4 789 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 PADI3Q9ULW8 664 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 HCN4Q9Y3Q4 1203 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 CYP46A1Q9Y6A2 500 aa13.76□□□□□ -0.21
PDLIM2-218ENST00000614502 TRIOO75962 3097 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 CPLX1O14810 134 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 GPR182O15218 404 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 MAGEB2O15479 319 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 LINC00271P0C7V0 271 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 PDIA3P30101 505 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 NLRP5P59047 1200 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 SSRP1Q08945 709 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 TMEM62Q0P6H9 643 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 NTRK3Q16288 839 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 PRR16Q569H4 304 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 NEK9Q8TD19 979 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 P2RX5Q93086 422 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 PPP2R3CQ969Q6 453 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 PABPC5Q96DU9 382 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 C1orf112Q9NSG2 853 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 SAMM50Q9Y512 469 aa13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 MAFBQ9Y5Q3 323 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-218ENST00000614502 PIEZO1Q92508 2521 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 GRXCR2A6NFK2 248 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 WDR64B1ANS9 1081 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 RPS6KA5O75582 802 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 TMOD1P28289 359 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 SFNP31947 248 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 SSTR3P32745 418 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 SARSP49591 514 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 CCT2P78371 535 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 NFX1Q12986 1120 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 ZBTB10Q96DT7 871 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 NRBP2Q9NSY0 501 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 PCDHB7Q9Y5E2 793 aa13.74□□□□□ -0.21
PDLIM2-218ENST00000614502 DENND3A2RUS2 1198 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 CSPG5O95196 566 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 DEXIO95424 95 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 EP400NLQ6ZTU2 488 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 KIAA0319LQ8IZA0 1049 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 MAP7D2Q96T17 732 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 RIT2Q99578 217 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 GABBR1Q9UBS5 961 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 WDFY4Q6ZS81 3184 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 ZNF318Q5VUA4 2279 aa13.73□□□□□ -0.21
PDLIM2-218ENST00000614502 GAS7O60861 476 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 CDKL5O76039 1030 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 C22orf31O95567 290 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 MMP1P03956 469 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 XBP1P17861 261 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 JAK3P52333 1124 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 TOB2Q14106 344 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 COL19A1Q14993 1142 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 SLC24A5Q71RS6 500 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 RTN4RL1Q86UN2 441 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 METTL13Q8N6R0 699 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 LINC01599Q8WXQ3 324 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 TEKT3Q9BXF9 490 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 ERVK-5Q9HDB9 667 aa13.72□□□□□ -0.21
PDLIM2-218ENST00000614502 AAASQ9NRG9 546 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms