RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, humanhuman

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-222ENST00000613508 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-222ENST00000613508 RAPGEFL1Q9UHV5 662 aa12.65□□□□□ -0.38
CBWD1-222ENST00000613508 MAFBQ9Y5Q3 323 aaPredicted RBP12.65□□□□□ -0.38
CBWD1-222ENST00000613508 MRPL42Q9Y6G3 142 aaKnown RBP12.65□□□□□ -0.38
CBWD1-222ENST00000613508 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 ATP4AP20648 1035 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 GNA11P29992 359 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 SARSP49591 514 aaKnown RBP12.64□□□□□ -0.39
CBWD1-222ENST00000613508 FGD1P98174 961 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 HYAL1Q12794 435 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 NTRK3Q16288 839 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 PDXDC2PQ6P474 469 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 Q6ZUG5 572 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 BICD2Q8TD16 824 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
CBWD1-222ENST00000613508 BRF1Q92994 677 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 ZNF577Q9BSK1 485 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 ERVK-5Q9HDB9 667 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
CBWD1-222ENST00000613508 DDX39AO00148 427 aaKnown RBP12.63□□□□□ -0.39
CBWD1-222ENST00000613508 ADAMTS3O15072 1205 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 C22orf31O95567 290 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 CPA1P15085 419 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 RPS6KB1P23443 525 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
CBWD1-222ENST00000613508 ZP2Q05996 745 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 ODR4Q5SWX8 454 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 LENG9Q96B70 501 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
CBWD1-222ENST00000613508 RNF26Q9BY78 433 aaPredicted RBP12.63□□□□□ -0.39
CBWD1-222ENST00000613508 RGS18Q9NS28 235 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 CLDND1Q9NY35 253 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 NOC2LQ9Y3T9 749 aaKnown RBP12.63□□□□□ -0.39
CBWD1-222ENST00000613508 PCDHA10Q9Y5I2 948 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 MYO7AQ13402 2215 aa12.63□□□□□ -0.39
CBWD1-222ENST00000613508 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 WDFY4Q6ZS81 3184 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 C9IYK1 514 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 GPR182O15218 404 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 EPB41L2O43491 1005 aaKnown RBP12.62□□□□□ -0.39
CBWD1-222ENST00000613508 RPS6KA5O75582 802 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 ITGB1P05556 798 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 ALADP13716 330 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 IFNAR1P17181 557 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 DNAJB1P25685 340 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 FAM189BP81408 668 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 ADAM15Q13444 863 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 SMAD2Q15796 467 aaKnown RBP12.62□□□□□ -0.39
CBWD1-222ENST00000613508 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 ADHFE1Q8IWW8 467 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 CCDC148Q8NFR7 591 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 SPPL3Q8TCT6 385 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 TMEM40Q8WWA1 233 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 PPP2R3CQ969Q6 453 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 FAM167AQ96KS9 214 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
CBWD1-222ENST00000613508 SH3GLB2Q9NR46 395 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
CBWD1-222ENST00000613508 ST3GAL5Q9UNP4 418 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
CBWD1-222ENST00000613508 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 MAGEB2O15479 319 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 EDIL3O43854 480 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 MGEA5O60502 916 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 TBX10O75333 385 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 GPR32O75388 356 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 REC8O95072 547 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 EYA4O95677 639 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 PSAPP07602 524 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 PSMA5P28066 241 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
CBWD1-222ENST00000613508 USP11P51784 963 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 AKAP17AQ02040 695 aaKnown RBP12.61□□□□□ -0.39
CBWD1-222ENST00000613508 UBE3AQ05086 875 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 DLX2Q07687 328 aaPredicted RBP12.61□□□□□ -0.39
CBWD1-222ENST00000613508 NFX1Q12986 1120 aaKnown RBP12.61□□□□□ -0.39
CBWD1-222ENST00000613508 PRR16Q569H4 304 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
CBWD1-222ENST00000613508 LINC01465Q8N7H1 131 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 EFHBQ8N7U6 833 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 KLHL23Q8NBE8 558 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 PHKBQ93100 1093 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 FAM122AQ96E09 287 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 RIT2Q99578 217 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 ADAM2Q99965 735 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 ELAC1Q9H777 363 aaKnown RBP12.61□□□□□ -0.39
CBWD1-222ENST00000613508 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 LRFN2Q9ULH4 789 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 HCN4Q9Y3Q4 1203 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 PCDHB7Q9Y5E2 793 aa12.61□□□□□ -0.39
CBWD1-222ENST00000613508 DENND3A2RUS2 1198 aa12.6□□□□□ -0.39
CBWD1-222ENST00000613508 WDR64B1ANS9 1081 aa12.6□□□□□ -0.39
CBWD1-222ENST00000613508 MBTPS2O43462 519 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms