RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 LOXHD1Q8IVV2 1947 aa20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 LAMA2P24043 3122 aaKnown RBP20.31■□□□□ 0.84
SEMA3B-211ENST00000612509 ARID2Q68CP9 1835 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 TMEM265A0A087WTH1 108 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 ABHD14A-ACY1A0A1B0GW23 586 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 H3BQV1 296 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 EFCAB14O75071 495 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 STBD1O95210 358 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 TMEM62Q0P6H9 643 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 EPHA7Q15375 998 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 RAB30Q15771 203 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 XKR3Q5GH77 459 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 IER5Q5VY09 327 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 DEFB123Q8N688 67 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 LXNQ9BS40 222 aa20.3■□□□□ 0.84
SEMA3B-211ENST00000612509 TMEM150BA6NC51 233 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 P4HBP07237 508 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 TXKP42681 527 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 QARSP47897 775 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 DEFB103AP81534 67 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 MKRN4PQ13434 485 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 IKBKEQ14164 716 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 LPIN1Q14693 890 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 ZNF174Q15697 407 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 FBXO47Q5MNV8 452 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 MCTP1Q6DN14 999 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 KIAA0319LQ8IZA0 1049 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 NME8Q8N427 588 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 PHOSPHO2Q8TCD6 241 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 APBB2Q92870 758 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 TIFAQ96CG3 184 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 IFIH1Q9BYX4 1025 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 TTC12Q9H892 705 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 PCDHA12Q9UN75 941 aa20.29■□□□□ 0.84
SEMA3B-211ENST00000612509 KDM3AQ9Y4C1 1321 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 K7ELQ4 463 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 MAGEB2O15479 319 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 DKC1O60832 514 aaKnown RBP eCLIP20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 OR52Z1P0C646 297 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 CLCN3P51790 818 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 RABGGTBP53611 331 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 NBR1Q14596 966 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 TARBP2Q15633 366 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 MTERF2Q49AM1 385 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 TSHZ1Q6ZSZ6 1077 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 METTL13Q8N6R0 699 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 LINC01465Q8N7H1 131 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 NIFKQ9BYG3 293 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 TTYH1Q9H313 450 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 WRAP73Q9P2S5 460 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 MSRAQ9UJ68 235 aa20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 YBX2Q9Y2T7 364 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-211ENST00000612509 POTEMA6NI47 508 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 CYP4A11Q02928 519 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 TBC1D8BQ0IIM8 1120 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 PLA2G4FQ68DD2 849 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 ANO5Q75V66 913 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 HERC6Q8IVU3 1022 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 LRRC71Q8N4P6 559 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 NEK9Q8TD19 979 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 DYDC2Q96IM9 177 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 CEP89Q96ST8 783 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 CELF4Q9BZC1 486 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 RGL1Q9NZL6 768 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 PCDHA11Q9Y5I1 949 aa20.27■□□□□ 0.84
SEMA3B-211ENST00000612509 TOB1P50616 345 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 CTTNQ14247 550 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 LARP1BQ659C4 914 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 C4orf19Q8IY42 314 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 FAM161BQ96MY7 647 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 MAP7D2Q96T17 732 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 PPP1R16BQ96T49 567 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 EIF2AK1Q9BQI3 630 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 SH2D3AQ9BRG2 576 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 NKX2-4Q9H2Z4 354 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 MTMR10Q9NXD2 777 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 SQORQ9Y6N5 450 aa20.26■□□□□ 0.83
SEMA3B-211ENST00000612509 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 VTNP04004 478 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 TMOD1P28289 359 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 EFCAB12Q6NXP0 572 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.25■□□□□ 0.838e-7■□□□□ 8.5
SEMA3B-211ENST00000612509 TMCO2Q7Z6W1 182 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 SNX21Q969T3 373 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 ZSWIM4Q9H7M6 989 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 AGO3Q9H9G7 860 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 AKT3Q9Y243 479 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 GINS2Q9Y248 185 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 PCDHB6Q9Y5E3 794 aa20.25■□□□□ 0.83
SEMA3B-211ENST00000612509 AMHP03971 560 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 MYOGP15173 224 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 CD52P31358 61 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 YWHABP31946 246 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 MYOCDQ8IZQ8 938 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 INTS4Q96HW7 963 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 GUCD1Q96NT3 240 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 OSMRQ99650 979 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 SEMA6BQ9H3T3 888 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 ZNF576Q9H609 170 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms