RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 SOBPA7XYQ1 873 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 FGBP02675 491 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 PTGISQ16647 500 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 LY6KQ17RY6 165 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 COBLL1Q53SF7 1204 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 RSPH3Q86UC2 560 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 LMBR1Q8WVP7 490 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 BADQ92934 168 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 STRA6Q9BX79 667 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 FAM124BQ9H5Z6 455 aaPredicted RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 TMEM134Q9H6X4 195 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 MAGEF1Q9HAY2 307 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 GPHNQ9NQX3 736 aaPredicted RBP8.09□□□□□ -1.11
CBWD1-219ENST00000611457 TMEM39AQ9NV64 488 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 COG5Q9UP83 839 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 UTRNP46939 3433 aa8.09□□□□□ -1.11
CBWD1-219ENST00000611457 VWA8A3KMH1 1905 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 PGK1P00558 417 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 PSMC5P62195 406 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 SNRPFP62306 86 aaKnown RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 PDE4CQ08493 712 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 GRIK4Q16099 956 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 HSDL1Q3SXM5 330 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 SH3RF1Q7Z6J0 888 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 TCP11Q8WWU5 503 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 GBP4Q96PP9 640 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 PRKAG3Q9UGI9 489 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 UBE4BO95155 1302 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 FRMD3A2A2Y4 597 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 DYNC1LI2O43237 492 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 C6orf222P0C671 652 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 ZNF131P52739 623 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 PAK2Q13177 524 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 CTC1Q2NKJ3 1217 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 CMASQ8NFW8 434 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 ATXN2LQ8WWM7 1075 aaKnown RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 SEMA6BQ9H3T3 888 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 EVPLQ92817 2033 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 IPO5O00410 1097 aaKnown RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 CHRNA1P02708 482 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 PROZP22891 400 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 TCF7P36402 384 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 ATP2C1P98194 919 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 GIT2Q14161 759 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 CBX2Q14781 532 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 NFIL3Q16649 462 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 KYAT1Q16773 422 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 HERC6Q8IVU3 1022 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 SPIRE2Q8WWL2 714 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 SEPT8Q92599 483 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 RAD9AQ99638 391 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 LBHD1Q9BQE6 289 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 HSFX1Q9UBD0 423 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 HDAC6Q9UBN7 1215 aa8.08□□□□□ -1.12
CBWD1-219ENST00000611457 V9GY48 417 aaPredicted RBP8.08□□□□□ -1.12
CBWD1-219ENST00000611457 C9IYK1 514 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 SOX1O00570 391 aaPredicted RBP8.07□□□□□ -1.12
CBWD1-219ENST00000611457 GUCY2CP25092 1073 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 LPIN1Q14693 890 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 NFXL1Q6ZNB6 911 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.07□□□□□ -1.12
CBWD1-219ENST00000611457 LPXNO60711 386 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 ATP9AO75110 1047 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 DGKIO75912 1065 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
CBWD1-219ENST00000611457 RPA1P27694 616 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 CDC25AP30304 524 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 SHHQ15465 462 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 KIAA0753Q2KHM9 967 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 IER5Q5VY09 327 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 LINC01599Q8WXQ3 324 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 CELF4Q9BZC1 486 aaKnown RBP8.07□□□□□ -1.12
CBWD1-219ENST00000611457 ZNF302Q9NR11 478 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 PRKAG2Q9UGJ0 569 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 STYXL1Q9Y6J8 313 aa8.07□□□□□ -1.12
CBWD1-219ENST00000611457 H3BNC9 293 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 MICAL2O94851 1124 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 GJB5O95377 273 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 CFBP00751 764 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 AMHP03971 560 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 ARP10275 920 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 C7P10643 843 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 ADD1P35611 737 aaKnown RBP8.06□□□□□ -1.12
CBWD1-219ENST00000611457 TCTN1Q2MV58 587 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 HSCBQ8IWL3 235 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 SPRYD3Q8NCJ5 442 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 FAXDC2Q96IV6 333 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 CEP295NLQ96MC4 621 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 NRBP2Q9NSY0 501 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 CITO14578 2027 aa8.06□□□□□ -1.12
CBWD1-219ENST00000611457 GOLGB1Q14789 3259 aaKnown RBP8.06□□□□□ -1.12
CBWD1-219ENST00000611457 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.06□□□□□ -1.12
CBWD1-219ENST00000611457 NASPP49321 788 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms