RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PADI3Q9ULW8 664 aa24.61■■□□□ 1.53
CBWD3-207ENST00000611426 TTC3P53804 2025 aa24.6■■□□□ 1.53
CBWD3-207ENST00000611426 CTNNB1P35222 781 aa24.6■■□□□ 1.53
CBWD3-207ENST00000611426 PAK2Q13177 524 aa24.6■■□□□ 1.53
CBWD3-207ENST00000611426 ZNF746Q6NUN9 644 aaPredicted RBP24.6■■□□□ 1.53
CBWD3-207ENST00000611426 UBE2ZQ9H832 354 aaPredicted RBP24.6■■□□□ 1.53
CBWD3-207ENST00000611426 ADGRA3Q8IWK6 1321 aa24.6■■□□□ 1.53
CBWD3-207ENST00000611426 IGSF9BQ9UPX0 1349 aa24.6■■□□□ 1.53
CBWD3-207ENST00000611426 LOXHD1Q8IVV2 1947 aa24.6■■□□□ 1.53
CBWD3-207ENST00000611426 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 HSP90AA1P07900 732 aaKnown RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 COL1A2P08123 1366 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 ATP4AP20648 1035 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 CIITAP33076 1130 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 TOB2Q14106 344 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 BTG3Q14201 252 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 RTN4RL1Q86UN2 441 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 SMAP1Q8IYB5 467 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 BANK1Q8NDB2 785 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 LINC01599Q8WXQ3 324 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 ZNF689Q96CS4 500 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 SLKQ9H2G2 1235 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 RC3H2Q9HBD1 1191 aaKnown RBP24.59■■□□□ 1.53
CBWD3-207ENST00000611426 GINS2Q9Y248 185 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 RWDD3Q9Y3V2 267 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 KDM3AQ9Y4C1 1321 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 PCDHA10Q9Y5I2 948 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 RALGAPA2Q2PPJ7 1873 aa24.59■■□□□ 1.53
CBWD3-207ENST00000611426 DGKIO75912 1065 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 RB1P06400 928 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 PSAPP07602 524 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 BMPR1AP36894 532 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 NLRP5P59047 1200 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 TIGD5Q53EQ6 642 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 TRIM22Q8IYM9 498 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 BBXQ8WY36 941 aaPredicted RBP24.58■■□□□ 1.53
CBWD3-207ENST00000611426 SH3GLB2Q9NR46 395 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 SAMM50Q9Y512 469 aa24.58■■□□□ 1.53
CBWD3-207ENST00000611426 MAFBQ9Y5Q3 323 aaPredicted RBP24.58■■□□□ 1.53
CBWD3-207ENST00000611426 MYH9P35579 1960 aaKnown RBP24.57■■□□□ 1.52
CBWD3-207ENST00000611426 SSRP1Q08945 709 aaKnown RBP24.57■■□□□ 1.52
CBWD3-207ENST00000611426 TRMT1LQ7Z2T5 733 aaKnown RBP24.57■■□□□ 1.52
CBWD3-207ENST00000611426 KIAA0319LQ8IZA0 1049 aa24.57■■□□□ 1.52
CBWD3-207ENST00000611426 ZBTB42B2RXF5 422 aa24.56■■□□□ 1.52
CBWD3-207ENST00000611426 C5orf67F2Z3F1 127 aa24.56■■□□□ 1.52
CBWD3-207ENST00000611426 KCNA5P22460 613 aa24.56■■□□□ 1.52
CBWD3-207ENST00000611426 NFX1Q12986 1120 aaKnown RBP24.56■■□□□ 1.52
CBWD3-207ENST00000611426 TMEM266Q2M3C6 531 aa24.56■■□□□ 1.52
CBWD3-207ENST00000611426 NPAS4Q8IUM7 802 aa24.56■■□□□ 1.52
CBWD3-207ENST00000611426 CLP1Q92989 425 aaKnown RBP24.56■■□□□ 1.52
CBWD3-207ENST00000611426 C11orf84Q9BUA3 381 aaPredicted RBP24.56■■□□□ 1.52
CBWD3-207ENST00000611426 GABBR1Q9UBS5 961 aa24.56■■□□□ 1.52
CBWD3-207ENST00000611426 EVPLQ92817 2033 aa24.56■■□□□ 1.52
CBWD3-207ENST00000611426 CPLX1O14810 134 aa24.55■■□□□ 1.52
CBWD3-207ENST00000611426 LINC00271P0C7V0 271 aa24.55■■□□□ 1.52
CBWD3-207ENST00000611426 STAG3L1P0CL83 205 aa24.55■■□□□ 1.52
CBWD3-207ENST00000611426 USP11P51784 963 aa24.55■■□□□ 1.52
CBWD3-207ENST00000611426 LENG9Q96B70 501 aa24.55■■□□□ 1.52
CBWD3-207ENST00000611426 ZNF274Q96GC6 653 aaPredicted RBP24.55■■□□□ 1.52
CBWD3-207ENST00000611426 LARP6Q9BRS8 491 aaKnown RBP24.55■■□□□ 1.52
CBWD3-207ENST00000611426 CDHR5Q9HBB8 845 aa24.55■■□□□ 1.52
CBWD3-207ENST00000611426 RPS6KA5O75582 802 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 LEXMQ3ZCV2 418 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 TCEAL5Q5H9L2 206 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 CRIPAKQ8N1N5 446 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 METTL13Q8N6R0 699 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 TMX1Q9H3N1 280 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 NSUN3Q9H649 340 aaKnown RBP24.54■■□□□ 1.52
CBWD3-207ENST00000611426 CEP131Q9UPN4 1083 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 WDR64B1ANS9 1081 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 MSH4O15457 936 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 C22orf31O95567 290 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 CMTR2Q8IYT2 770 aaKnown RBP24.54■■□□□ 1.52
CBWD3-207ENST00000611426 LMAN2LQ9H0V9 348 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 LRFN2Q9ULH4 789 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 PCDHA4Q9UN74 947 aa24.54■■□□□ 1.52
CBWD3-207ENST00000611426 NOC2LQ9Y3T9 749 aaKnown RBP24.54■■□□□ 1.52
CBWD3-207ENST00000611426 GRM6O15303 877 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 EDIL3O43854 480 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 DEXIO95424 95 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 IBSPP21815 317 aaPredicted RBP24.53■■□□□ 1.52
CBWD3-207ENST00000611426 STK3Q13188 491 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 ODR4Q5SWX8 454 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 CPLX2Q6PUV4 134 aaKnown RBP24.53■■□□□ 1.52
CBWD3-207ENST00000611426 FAM43BQ6ZT52 329 aaPredicted RBP24.53■■□□□ 1.52
CBWD3-207ENST00000611426 EP400NLQ6ZTU2 488 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 SPRYD3Q8NCJ5 442 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.53■■□□□ 1.52
CBWD3-207ENST00000611426 TBCKQ8TEA7 893 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 FAM167AQ96KS9 214 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 PPP1R16BQ96T49 567 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 PLVAPQ9BX97 442 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 ERVK-5Q9HDB9 667 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 DISC1Q9NRI5 854 aa24.53■■□□□ 1.52
CBWD3-207ENST00000611426 MYO7AQ13402 2215 aa24.52■■□□□ 1.52
CBWD3-207ENST00000611426 CRYBB1P53674 252 aaPredicted RBP24.52■■□□□ 1.52
CBWD3-207ENST00000611426 KIZQ2M2Z5 673 aa24.52■■□□□ 1.52
CBWD3-207ENST00000611426 PAN2Q504Q3 1202 aaKnown RBP24.52■■□□□ 1.52
CBWD3-207ENST00000611426 TMEM40Q8WWA1 233 aa24.52■■□□□ 1.52
CBWD3-207ENST00000611426 RIT2Q99578 217 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms