RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 NAALADL2Q58DX5 795 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 PDXDC2PQ6P474 469 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 NIPA1Q7RTP0 329 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 SPPL3Q8TCT6 385 aa27.73■■■□□ 2.03
CDKN3-211ENST00000611205 C19orf67A6NJJ6 358 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 RPS6KA5O75582 802 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 HOXD11P31277 338 aaPredicted RBP27.72■■■□□ 2.03
CDKN3-211ENST00000611205 NDUFV1P49821 464 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 KRT32Q14532 448 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 TSGA10IPQ3SY00 556 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 SWSAP1Q6NVH7 229 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 MIS18BP1Q6P0N0 1132 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 POF1BQ8WVV4 589 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 PPP1R16BQ96T49 567 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 CDHR5Q9HBB8 845 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 CD207Q9UJ71 328 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 NOC2LQ9Y3T9 749 aaKnown RBP27.72■■■□□ 2.03
CDKN3-211ENST00000611205 PCDHB7Q9Y5E2 793 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 COL1A2P08123 1366 aa27.72■■■□□ 2.03
CDKN3-211ENST00000611205 MGEA5O60502 916 aa27.71■■■□□ 2.03
CDKN3-211ENST00000611205 IRS1P35568 1242 aa27.71■■■□□ 2.03
CDKN3-211ENST00000611205 SARSP49591 514 aaKnown RBP27.71■■■□□ 2.03
CDKN3-211ENST00000611205 METAP2P50579 478 aaKnown RBP eCLIP27.71■■■□□ 2.03
CDKN3-211ENST00000611205 ADAM15Q13444 863 aa27.71■■■□□ 2.03
CDKN3-211ENST00000611205 SMAD4Q13485 552 aaKnown RBP27.71■■■□□ 2.03
CDKN3-211ENST00000611205 SPOUT1Q5T280 376 aaKnown RBP27.71■■■□□ 2.03
CDKN3-211ENST00000611205 ADGRD2Q7Z7M1 963 aa27.71■■■□□ 2.03
CDKN3-211ENST00000611205 CKAP2LQ8IYA6 745 aa27.71■■■□□ 2.03
CDKN3-211ENST00000611205 ERVK-5Q9HDB9 667 aa27.71■■■□□ 2.03
CDKN3-211ENST00000611205 DENND3A2RUS2 1198 aa27.7■■■□□ 2.02
CDKN3-211ENST00000611205 IPO5O00410 1097 aaKnown RBP27.7■■■□□ 2.02
CDKN3-211ENST00000611205 ADD1P35611 737 aaKnown RBP27.7■■■□□ 2.02
CDKN3-211ENST00000611205 PFKFB3Q16875 520 aaPredicted RBP27.7■■■□□ 2.02
CDKN3-211ENST00000611205 ZNF484Q5JVG2 852 aa27.7■■■□□ 2.02
CDKN3-211ENST00000611205 TRMT1LQ7Z2T5 733 aaKnown RBP27.7■■■□□ 2.02
CDKN3-211ENST00000611205 KIAA0319LQ8IZA0 1049 aa27.7■■■□□ 2.02
CDKN3-211ENST00000611205 TMEM40Q8WWA1 233 aa27.7■■■□□ 2.02
CDKN3-211ENST00000611205 ZNF577Q9BSK1 485 aa27.7■■■□□ 2.02
CDKN3-211ENST00000611205 UPF3BQ9BZI7 483 aaKnown RBP27.7■■■□□ 2.02
CDKN3-211ENST00000611205 IGLV3-22A0A075B6J6 115 aa27.69■■■□□ 2.02
CDKN3-211ENST00000611205 DHX15O43143 795 aaKnown RBP27.69■■■□□ 2.02
CDKN3-211ENST00000611205 PPFIA3O75145 1194 aa27.69■■■□□ 2.02
CDKN3-211ENST00000611205 CPA1P15085 419 aa27.69■■■□□ 2.02
CDKN3-211ENST00000611205 RCAN1P53805 252 aa27.69■■■□□ 2.02
CDKN3-211ENST00000611205 POP1Q99575 1024 aaKnown RBP27.69■■■□□ 2.02
CDKN3-211ENST00000611205 ADAM2Q99965 735 aa27.69■■■□□ 2.02
CDKN3-211ENST00000611205 CDC45O75419 566 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 CYP3A4P08684 503 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 HMGB1P09429 215 aaKnown RBP27.68■■■□□ 2.02
CDKN3-211ENST00000611205 ATP4AP20648 1035 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 NRIP1P48552 1158 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 APOBRQ0VD83 1088 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 ODR4Q5SWX8 454 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 RBM23Q86U06 439 aaKnown RBP27.68■■■□□ 2.02
CDKN3-211ENST00000611205 OSMRQ99650 979 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 TCEAL9Q9UHQ7 104 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 ST3GAL5Q9UNP4 418 aa27.68■■■□□ 2.02
CDKN3-211ENST00000611205 CCDC196A0A1B0GTZ2 297 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 TBKBP1A7MCY6 615 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 ZBTB42B2RXF5 422 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 ADAMTS3O15072 1205 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 KIZQ2M2Z5 673 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 CRYGNQ8WXF5 182 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 C6orf50Q9HD87 102 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 RGS18Q9NS28 235 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 C1orf112Q9NSG2 853 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 TBC1D22BQ9NU19 505 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 PCDHB12Q9Y5F1 795 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 PCDHGC5Q9Y5F6 944 aa27.67■■■□□ 2.02
CDKN3-211ENST00000611205 GPR182O15218 404 aa27.66■■■□□ 2.02
CDKN3-211ENST00000611205 SETQ01105 290 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-211ENST00000611205 FAM102BQ5T8I3 360 aa27.66■■■□□ 2.02
CDKN3-211ENST00000611205 Q6ZUG5 572 aa27.66■■■□□ 2.02
CDKN3-211ENST00000611205 CENPQQ7L2Z9 268 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-211ENST00000611205 REXO1Q8N1G1 1221 aaKnown RBP27.66■■■□□ 2.02
CDKN3-211ENST00000611205 METTL13Q8N6R0 699 aa27.66■■■□□ 2.02
CDKN3-211ENST00000611205 EFHBQ8N7U6 833 aa27.66■■■□□ 2.02
CDKN3-211ENST00000611205 CCDC12Q8WUD4 166 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-211ENST00000611205 BBXQ8WY36 941 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-211ENST00000611205 ZMYND12Q9H0C1 365 aa27.66■■■□□ 2.02
CDKN3-211ENST00000611205 RNF216Q9NWF9 866 aaPredicted RBP27.66■■■□□ 2.02
CDKN3-211ENST00000611205 ESYT2A0FGR8 921 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 C22orf31O95567 290 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 VTNP04004 478 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 ZNF746Q6NUN9 644 aaPredicted RBP27.65■■■□□ 2.02
CDKN3-211ENST00000611205 SLC24A5Q71RS6 500 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 MICAL1Q8TDZ2 1067 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 BRF1Q92994 677 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 MSLNLQ96KJ4 702 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 AAASQ9NRG9 546 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 MUTYHQ9UIF7 546 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 MUC6Q6W4X9 2439 aa27.65■■■□□ 2.02
CDKN3-211ENST00000611205 PSAPP07602 524 aa27.64■■■□□ 2.02
CDKN3-211ENST00000611205 CRYBB1P53674 252 aaPredicted RBP27.64■■■□□ 2.02
CDKN3-211ENST00000611205 PRR16Q569H4 304 aa27.64■■■□□ 2.02
CDKN3-211ENST00000611205 MCTP2Q6DN12 878 aa27.64■■■□□ 2.02
CDKN3-211ENST00000611205 FAM228AQ86W67 206 aa27.64■■■□□ 2.02
CDKN3-211ENST00000611205 CLEC1BQ9P126 229 aa27.64■■■□□ 2.02
CDKN3-211ENST00000611205 GABBR1Q9UBS5 961 aa27.64■■■□□ 2.02
CDKN3-211ENST00000611205 BARX2Q9UMQ3 279 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms