RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CDY2AQ9Y6F7 541 aa14.36□□□□□ -0.11
CD9-212ENST00000610354 MYO9BQ13459 2157 aa14.36□□□□□ -0.11
CD9-212ENST00000610354 CHD9Q3L8U1 2897 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 MYOGP15173 224 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 DNAJB2P25686 324 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 WDR5P61964 334 aaKnown RBP14.35□□□□□ -0.11
CD9-212ENST00000610354 DEFB103AP81534 67 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 MRPS6P82932 125 aaKnown RBP14.35□□□□□ -0.11
CD9-212ENST00000610354 TMEM62Q0P6H9 643 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 NBR1Q14596 966 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 LPIN1Q14693 890 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 EPHA7Q15375 998 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 ZNF174Q15697 407 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 FBXO47Q5MNV8 452 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
CD9-212ENST00000610354 DEFB123Q8N688 67 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 C4orf32Q8N8J7 132 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
CD9-212ENST00000610354 SEMA6BQ9H3T3 888 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 CDHR5Q9HBB8 845 aa14.35□□□□□ -0.11
CD9-212ENST00000610354 NEMFO60524 1076 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 BAIAP3O94812 1187 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 GHRP10912 638 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 ATP2A2P16615 1042 aaKnown RBP14.34□□□□□ -0.11
CD9-212ENST00000610354 MCM7P33993 719 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 CALCRLQ16602 461 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 NCAPH2Q6IBW4 605 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 SLFN12Q8IYM2 578 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
CD9-212ENST00000610354 DYDC2Q96IM9 177 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 FAM167AQ96KS9 214 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 FAM161BQ96MY7 647 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 GUCD1Q96NT3 240 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 SH2D3AQ9BRG2 576 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 NIFKQ9BYG3 293 aaKnown RBP14.34□□□□□ -0.11
CD9-212ENST00000610354 MTIF3Q9H2K0 278 aaKnown RBP14.34□□□□□ -0.11
CD9-212ENST00000610354 AGO3Q9H9G7 860 aaKnown RBP14.34□□□□□ -0.11
CD9-212ENST00000610354 NRBP2Q9NSY0 501 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 RGL1Q9NZL6 768 aa14.34□□□□□ -0.11
CD9-212ENST00000610354 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.33□□□□□ -0.12
CD9-212ENST00000610354 ARHGEF15O94989 841 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 BAG4O95429 457 aaKnown RBP14.33□□□□□ -0.12
CD9-212ENST00000610354 TXKP42681 527 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 CLCN3P51790 818 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 PSMC5P62195 406 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 IKBKEQ14164 716 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 XKR3Q5GH77 459 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 TTC38Q5R3I4 469 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 ANO5Q75V66 913 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 RSPH3Q86UC2 560 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 TIFAQ96CG3 184 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 CELF4Q9BZC1 486 aaKnown RBP14.33□□□□□ -0.12
CD9-212ENST00000610354 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.12
CD9-212ENST00000610354 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 SMC3Q9UQE7 1217 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 TRPV2Q9Y5S1 764 aa14.33□□□□□ -0.12
CD9-212ENST00000610354 KDM3AQ9Y4C1 1321 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 ARID2Q68CP9 1835 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 DDX11L8A8MPP1 907 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 ZBTB39O15060 712 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 MARCH6O60337 910 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 P4HBP07237 508 aaKnown RBP14.32□□□□□ -0.12
CD9-212ENST00000610354 QARSP47897 775 aaKnown RBP14.32□□□□□ -0.12
CD9-212ENST00000610354 DRP2Q13474 957 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 CTTNQ14247 550 aaKnown RBP14.32□□□□□ -0.12
CD9-212ENST00000610354 MTERF2Q49AM1 385 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 PLA2G4FQ68DD2 849 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 EFCAB12Q6NXP0 572 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 RTN4RL1Q86UN2 441 aaPredicted RBP14.32□□□□□ -0.12
CD9-212ENST00000610354 HERC6Q8IVU3 1022 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 NME8Q8N427 588 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 LRRC71Q8N4P6 559 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 PHOSPHO2Q8TCD6 241 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 TMEM40Q8WWA1 233 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 SEPT8Q92599 483 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 SLC9A7Q96T83 725 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 HSD17B14Q9BPX1 270 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 SEPT9Q9UHD8 586 aaPredicted RBP14.32□□□□□ -0.12
CD9-212ENST00000610354 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 PCDHA11Q9Y5I1 949 aa14.32□□□□□ -0.12
CD9-212ENST00000610354 IGKV6-21A0A0C4DH24 114 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 POTEMA6NI47 508 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 MAGEB2O15479 319 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 GPR32O75388 356 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 SLITRK3O94933 977 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 VTNP04004 478 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 CD52P31358 61 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 NPEPPSP55786 919 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 CYP4A11Q02928 519 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 ZNF697Q5TEC3 545 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 IER5Q5VY09 327 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 LINC01599Q8WXQ3 324 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 PPP1R16BQ96T49 567 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 EIF2AK1Q9BQI3 630 aaKnown RBP14.31□□□□□ -0.12
CD9-212ENST00000610354 LXNQ9BS40 222 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 IFIH1Q9BYX4 1025 aaKnown RBP14.31□□□□□ -0.12
CD9-212ENST00000610354 CEP131Q9UPN4 1083 aa14.31□□□□□ -0.12
CD9-212ENST00000610354 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms