RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.15■□□□□ 0.5
SGMS1-209ENST00000609445 TMEM40Q8WWA1 233 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 CLP1Q92989 425 aaKnown RBP18.15■□□□□ 0.5
SGMS1-209ENST00000609445 TMX1Q9H3N1 280 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 RAPGEFL1Q9UHV5 662 aa18.15■□□□□ 0.5
SGMS1-209ENST00000609445 NOC2LQ9Y3T9 749 aaKnown RBP18.15■□□□□ 0.5
SGMS1-209ENST00000609445 MRPL42Q9Y6G3 142 aaKnown RBP18.15■□□□□ 0.5
SGMS1-209ENST00000609445 H3BQ06 376 aaPredicted RBP18.14■□□□□ 0.49
SGMS1-209ENST00000609445 MGEA5O60502 916 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 COL9A1P20849 921 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 GATMP50440 423 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 NFX1Q12986 1120 aaKnown RBP18.14■□□□□ 0.49
SGMS1-209ENST00000609445 LEXMQ3ZCV2 418 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 PAN2Q504Q3 1202 aaKnown RBP18.14■□□□□ 0.49
SGMS1-209ENST00000609445 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 BICD2Q8TD16 824 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 KHSRPQ92945 711 aaKnown RBP eCLIP18.14■□□□□ 0.493e-7■■■□□ 15
SGMS1-209ENST00000609445 FTHL17Q9BXU8 183 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 ZSWIM6Q9HCJ5 1215 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 CD320Q9NPF0 282 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 GABBR1Q9UBS5 961 aa18.14■□□□□ 0.49
SGMS1-209ENST00000609445 MAFBQ9Y5Q3 323 aaPredicted RBP18.14■□□□□ 0.49
SGMS1-209ENST00000609445 C22orf31O95567 290 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 RB1P06400 928 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 PSAPP07602 524 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 NLRP5P59047 1200 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 EP400NLQ6ZTU2 488 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 C11orf84Q9BUA3 381 aaPredicted RBP18.13■□□□□ 0.49
SGMS1-209ENST00000609445 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
SGMS1-209ENST00000609445 NSUN3Q9H649 340 aaKnown RBP18.13■□□□□ 0.49
SGMS1-209ENST00000609445 ERVK-5Q9HDB9 667 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 TCEAL9Q9UHQ7 104 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 RWDD3Q9Y3V2 267 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 PCDHA10Q9Y5I2 948 aa18.13■□□□□ 0.49
SGMS1-209ENST00000609445 FNDC1Q4ZHG4 1894 aaPredicted RBP18.12■□□□□ 0.49
SGMS1-209ENST00000609445 MSH4O15457 936 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 RPS6KA5O75582 802 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 VTNP04004 478 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 IL9P15248 144 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 KIZQ2M2Z5 673 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 SMAP1Q8IYB5 467 aaPredicted RBP18.12■□□□□ 0.49
SGMS1-209ENST00000609445 CMTR2Q8IYT2 770 aaKnown RBP18.12■□□□□ 0.49
SGMS1-209ENST00000609445 BBXQ8WY36 941 aaPredicted RBP18.12■□□□□ 0.49
SGMS1-209ENST00000609445 GJA10Q969M2 543 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 EPHX3Q9H6B9 360 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
SGMS1-209ENST00000609445 SAMM50Q9Y512 469 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 CYP46A1Q9Y6A2 500 aa18.12■□□□□ 0.49
SGMS1-209ENST00000609445 ZNF862O60290 1169 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 STAG3L1P0CL83 205 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 CLCN3P51790 818 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 SSRP1Q08945 709 aaKnown RBP18.11■□□□□ 0.49
SGMS1-209ENST00000609445 STK3Q13188 491 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 PTCRAQ6ISU1 281 aaPredicted RBP18.11■□□□□ 0.49
SGMS1-209ENST00000609445 METTL13Q8N6R0 699 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 NEK9Q8TD19 979 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 PABPC5Q96DU9 382 aaKnown RBP18.11■□□□□ 0.49
SGMS1-209ENST00000609445 AIFM3Q96NN9 605 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 OSMRQ99650 979 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 LMAN2LQ9H0V9 348 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 SH3GLB2Q9NR46 395 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 ST3GAL5Q9UNP4 418 aa18.11■□□□□ 0.49
SGMS1-209ENST00000609445 PLXNA4Q9HCM2 1894 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 WDR64B1ANS9 1081 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 CHMP2AO43633 222 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 DNAJB1P25685 340 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 SARSP49591 514 aaKnown RBP18.1■□□□□ 0.49
SGMS1-209ENST00000609445 COL19A1Q14993 1142 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 UGCGQ16739 394 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 FAM228AQ86W67 206 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 FAM178BQ8IXR5 827 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 TRIM22Q8IYM9 498 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 TBCKQ8TEA7 893 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 ZNF274Q96GC6 653 aaPredicted RBP18.1■□□□□ 0.49
SGMS1-209ENST00000609445 ADAM2Q99965 735 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 UNC45AQ9H3U1 944 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 DISC1Q9NRI5 854 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 CLDND1Q9NY35 253 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 LRFN2Q9ULH4 789 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 PLAGL2Q9UPG8 496 aa18.1■□□□□ 0.49
SGMS1-209ENST00000609445 DENND3A2RUS2 1198 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 CPLX1O14810 134 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 EPB41L2O43491 1005 aaKnown RBP18.09■□□□□ 0.49
SGMS1-209ENST00000609445 GAS7O60861 476 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 DTNBO60941 627 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 GPR32O75388 356 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 TDP2O95551 362 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 MMP1P03956 469 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 ITGB1P05556 798 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 GTF2F1P35269 517 aaKnown RBP eCLIP18.09■□□□□ 0.49
SGMS1-209ENST00000609445 USP11P51784 963 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 CRYBB1P53674 252 aaPredicted RBP18.09■□□□□ 0.49
SGMS1-209ENST00000609445 HYAL1Q12794 435 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 CAMK1Q14012 370 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 LRRC71Q8N4P6 559 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 SLC5A5Q92911 643 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 ZNF668Q96K58 619 aaPredicted RBP18.09■□□□□ 0.49
SGMS1-209ENST00000609445 PLVAPQ9BX97 442 aa18.09■□□□□ 0.49
SGMS1-209ENST00000609445 TEKT3Q9BXF9 490 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms