RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FGFBP2Q9BYJ0 223 aa24.35■■□□□ 1.49
SHANK2-220ENST00000608988 KIAA1024Q9UPX6 916 aa24.35■■□□□ 1.49
SHANK2-220ENST00000608988 CNTNAP4Q9C0A0 1308 aa24.35■■□□□ 1.49
SHANK2-220ENST00000608988 ASAP2O43150 1006 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 XRCC5P13010 732 aaKnown RBP24.34■■□□□ 1.49
SHANK2-220ENST00000608988 EZRP15311 586 aaKnown RBP24.34■■□□□ 1.49
SHANK2-220ENST00000608988 ITIH4Q14624 930 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 DIXDC1Q155Q3 683 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 SLF2Q8IX21 1173 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 TEX11Q8IYF3 940 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 FMO2Q99518 471 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 AMACRQ9UHK6 382 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 RPL13P26373 211 aaKnown RBP24.34■■□□□ 1.49
SHANK2-220ENST00000608988 BTDP43251 543 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 DRG2P55039 364 aaKnown RBP24.34■■□□□ 1.49
SHANK2-220ENST00000608988 PTENP60484 403 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 ENOX2Q16206 610 aaKnown RBP24.34■■□□□ 1.49
SHANK2-220ENST00000608988 KNOP1Q1ED39 458 aaKnown RBP24.34■■□□□ 1.49
SHANK2-220ENST00000608988 BMT2Q1RMZ1 405 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 TBC1D9BQ66K14 1250 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 ANKS4BQ8N8V4 417 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 CCDC197Q8NCU1 140 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 HVCN1Q96D96 273 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 FAM163AQ96GL9 167 aaPredicted RBP24.34■■□□□ 1.49
SHANK2-220ENST00000608988 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.34■■□□□ 1.499e-7■■■□□ 19
SHANK2-220ENST00000608988 TBC1D7Q9P0N9 293 aa24.34■■□□□ 1.49
SHANK2-220ENST00000608988 COL16A1Q07092 1604 aaPredicted RBP24.33■■□□□ 1.49
SHANK2-220ENST00000608988 GOLGA6L10A0A0M3HER8 536 aa24.33■■□□□ 1.49
SHANK2-220ENST00000608988 SLC9A1P19634 815 aa24.33■■□□□ 1.49
SHANK2-220ENST00000608988 LMNB1P20700 586 aa24.33■■□□□ 1.49
SHANK2-220ENST00000608988 ELF1P32519 619 aa24.33■■□□□ 1.49
SHANK2-220ENST00000608988 DHX34Q14147 1143 aaKnown RBP24.33■■□□□ 1.49
SHANK2-220ENST00000608988 MOXD1Q6UVY6 613 aa24.33■■□□□ 1.49
SHANK2-220ENST00000608988 EPM2AIP1Q7L775 607 aaPredicted RBP24.33■■□□□ 1.49
SHANK2-220ENST00000608988 DHX36Q9H2U1 1008 aaKnown RBP24.33■■□□□ 1.49
SHANK2-220ENST00000608988 JAG2Q9Y219 1238 aa24.33■■□□□ 1.49
SHANK2-220ENST00000608988 E9PMD0 336 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 TTI1O43156 1089 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 MGRN1O60291 552 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 KRT18P05783 430 aaKnown RBP24.32■■□□□ 1.48
SHANK2-220ENST00000608988 ACTN1P12814 892 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 FLT3P36888 993 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 SLC12A3P55017 1021 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 DAAM2Q86T65 1068 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 SLFN12Q8IYM2 578 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 SETDB2Q96T68 719 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 MTMR4Q9NYA4 1195 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 CCT8L1PA6NM43 557 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 CCDC169A6NNP5 214 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 TRIM37O94972 964 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 TMEM253P0C7T8 217 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 ITGA4P13612 1032 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 NBPF5PQ86XG9 351 aaPredicted RBP24.32■■□□□ 1.48
SHANK2-220ENST00000608988 RBM46Q8TBY0 533 aaKnown RBP24.32■■□□□ 1.48
SHANK2-220ENST00000608988 MBOAT7Q96N66 472 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 CARD9Q9H257 536 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 CCDC134Q9H6E4 229 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 ODF2LQ9ULJ1 636 aa24.32■■□□□ 1.48
SHANK2-220ENST00000608988 ATF5Q9Y2D1 282 aaPredicted RBP24.32■■□□□ 1.48
SHANK2-220ENST00000608988 CYP3A7-CYP3A51PA0A087WV96 503 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 HSPA6P17066 643 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 CYP3A7P24462 503 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 TM4SF1P30408 202 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 STAT1P42224 750 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 TPTE2Q6XPS3 522 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 ATP8B4Q8TF62 1192 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 RFFLQ8WZ73 363 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 ACSBG1Q96GR2 724 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 STMN4Q9H169 189 aaPredicted RBP24.31■■□□□ 1.48
SHANK2-220ENST00000608988 SIX2Q9NPC8 291 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 TYW1Q9NV66 732 aaKnown RBP24.31■■□□□ 1.48
SHANK2-220ENST00000608988 HAUS2Q9NVX0 235 aa24.31■■□□□ 1.48
SHANK2-220ENST00000608988 FRMPD2Q68DX3 1309 aaPredicted RBP24.31■■□□□ 1.48
SHANK2-220ENST00000608988 IGKV6D-41A0A0C4DH26 115 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 DDX3XO00571 662 aaKnown RBP eCLIP24.3■■□□□ 1.48
SHANK2-220ENST00000608988 DUPD1Q68J44 220 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 SLC30A5Q8TAD4 765 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 ERMNQ8TAM6 284 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 TMEM109Q9BVC6 243 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 PABPC3Q9H361 631 aaKnown RBP24.3■■□□□ 1.48
SHANK2-220ENST00000608988 ATP6V0A4Q9HBG4 840 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 KCNMB3Q9NPA1 279 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 CNOT7Q9UIV1 285 aaKnown RBP24.3■■□□□ 1.48
SHANK2-220ENST00000608988 RASAL2Q9UJF2 1139 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 TPX2Q9ULW0 747 aaKnown RBP24.3■■□□□ 1.48
SHANK2-220ENST00000608988 PPIP5K2O43314 1243 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 MMP13P45452 471 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 ZNF543Q08ER8 600 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 ARSHQ5FYA8 562 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 KCTD17Q8N5Z5 321 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 NEK9Q8TD19 979 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 ZNF317Q96PQ6 595 aaPredicted RBP24.3■■□□□ 1.48
SHANK2-220ENST00000608988 ERP44Q9BS26 406 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 JMJD4Q9H9V9 463 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 VEZTQ9HBM0 779 aa24.3■■□□□ 1.48
SHANK2-220ENST00000608988 AHDC1Q5TGY3 1603 aaPredicted RBP24.29■■□□□ 1.48
SHANK2-220ENST00000608988 F8W031 263 aaPredicted RBP24.29■■□□□ 1.48
SHANK2-220ENST00000608988 GPATCH4Q5T3I0 446 aaKnown RBP24.29■■□□□ 1.48
SHANK2-220ENST00000608988 BICDL1Q6ZP65 573 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms