RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ANKEF1Q9NU02 776 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 MORC2Q9Y6X9 1032 aaPredicted RBP15.95■□□□□ 0.14
CTSA-219ENST00000607841 DNAH12Q6ZR08 3092 aa15.95■□□□□ 0.14
CTSA-219ENST00000607841 ZBTB42B2RXF5 422 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 IQCF3P0C7M6 154 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 SPATA31C1P0DKV0 1188 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 RFC2P35250 354 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 MAGEA10P43363 369 aaPredicted RBP15.94■□□□□ 0.14
CTSA-219ENST00000607841 NASPP49321 788 aaPredicted RBP15.94■□□□□ 0.14
CTSA-219ENST00000607841 CCL23P55773 120 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 FPGSQ05932 587 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 PPIGQ13427 754 aaKnown RBP eCLIP15.94■□□□□ 0.144e-6■■■■□ 20
CTSA-219ENST00000607841 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 STK38Q15208 465 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 TARBP2Q15633 366 aaKnown RBP15.94■□□□□ 0.14
CTSA-219ENST00000607841 TRIM71Q2Q1W2 868 aaKnown RBP15.94■□□□□ 0.14
CTSA-219ENST00000607841 LRRC8DQ7L1W4 858 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 KCTD17Q8N5Z5 321 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 METTL13Q8N6R0 699 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 FTOQ9C0B1 505 aaKnown RBP eCLIP15.94■□□□□ 0.14
CTSA-219ENST00000607841 CYP26B1Q9NR63 512 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 WRAP73Q9P2S5 460 aaPredicted RBP15.94■□□□□ 0.14
CTSA-219ENST00000607841 UMODL1Q5DID0 1318 aa15.94■□□□□ 0.14
CTSA-219ENST00000607841 RSPH10B2B2RC85 870 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 M0QZ92 97 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 SLC26A4O43511 780 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 MED24O75448 989 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 C22orf31O95567 290 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 YEATS4O95619 227 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 RSPH10BP0C881 870 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 RFC5P40937 340 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 UBA7P41226 1012 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 DNM2P50570 870 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 FOXD4L6Q3SYB3 417 aaPredicted RBP15.93■□□□□ 0.14
CTSA-219ENST00000607841 XKR9Q5GH70 373 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 IER5Q5VY09 327 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 FOXD4L3Q6VB84 417 aaPredicted RBP15.93■□□□□ 0.14
CTSA-219ENST00000607841 RUFY4Q6ZNE9 571 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 RPUSD2Q8IZ73 545 aaKnown RBP15.93■□□□□ 0.14
CTSA-219ENST00000607841 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 LINC00301Q8NCQ3 95 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 DNAJB3Q8WWF6 145 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 SLC7A3Q8WY07 619 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 WNT8BQ93098 351 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 FAM49AQ9H0Q0 323 aaPredicted RBP15.93■□□□□ 0.14
CTSA-219ENST00000607841 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 TFIP11Q9UBB9 837 aaKnown RBP15.93■□□□□ 0.14
CTSA-219ENST00000607841 ZDHHC9Q9Y397 364 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 SRPRBQ9Y5M8 271 aaKnown RBP15.93■□□□□ 0.14
CTSA-219ENST00000607841 KDM3AQ9Y4C1 1321 aa15.93■□□□□ 0.14
CTSA-219ENST00000607841 ALPK3Q96L96 1907 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 SPTLC2O15270 562 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 PFKMP08237 780 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 CSF2RAP15509 400 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 MARCKSP29966 332 aaPredicted RBP15.92■□□□□ 0.14
CTSA-219ENST00000607841 ZNF618Q5T7W0 954 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 PLA2G4FQ68DD2 849 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 EFCAB12Q6NXP0 572 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 KRI1Q8N9T8 703 aaKnown RBP15.92■□□□□ 0.14
CTSA-219ENST00000607841 ZBTB10Q96DT7 871 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 CDK5RAP3Q96JB5 506 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 MAP7D2Q96T17 732 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 GDF15Q99988 308 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 UBE2OQ9C0C9 1292 aaKnown RBP15.92■□□□□ 0.14
CTSA-219ENST00000607841 NT5C3AQ9H0P0 336 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 SUGCTQ9HAC7 445 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 KIAA1024Q9UPX6 916 aa15.92■□□□□ 0.14
CTSA-219ENST00000607841 TMEM150BA6NC51 233 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 PP2D1A8MPX8 630 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 GAS2O43903 313 aaKnown RBP15.91■□□□□ 0.14
CTSA-219ENST00000607841 PPP6R2O75170 966 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 MAFO75444 373 aaPredicted RBP15.91■□□□□ 0.14
CTSA-219ENST00000607841 CDC25AP30304 524 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 BMP8BP34820 402 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 RARRES1P49788 294 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 POLGP54098 1239 aaPredicted RBP15.91■□□□□ 0.14
CTSA-219ENST00000607841 NPEPPSP55786 919 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 KRT85P78386 507 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 CDC42EP1Q00587 391 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 DNM1Q05193 864 aaKnown RBP15.91■□□□□ 0.14
CTSA-219ENST00000607841 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 POTEGQ6S5H5 508 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 CABP7Q86V35 215 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 KIAA0319LQ8IZA0 1049 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 KCNG4Q8TDN1 519 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 PIGOQ8TEQ8 1089 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 CALML4Q96GE6 196 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 SCLYQ96I15 445 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 CEP89Q96ST8 783 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 SH2D3AQ9BRG2 576 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 IL23AQ9NPF7 189 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 FBXO2Q9UK22 296 aaPredicted RBP15.91■□□□□ 0.14
CTSA-219ENST00000607841 DBR1Q9UK59 544 aaKnown RBP15.91■□□□□ 0.14
CTSA-219ENST00000607841 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
CTSA-219ENST00000607841 DNM3Q9UQ16 869 aa15.91■□□□□ 0.14
CTSA-219ENST00000607841 IGKV6-21A0A0C4DH24 114 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 DGAT1O75907 488 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 CTSHP09668 335 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 DDIT3P35638 169 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 TXLNAP40222 546 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms