RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 EFCAB14O75071 495 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 UPP2O95045 317 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 KRT2P35908 639 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 GUCY1B3Q02153 619 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 CCDC85BQ15834 202 aaPredicted RBP13.88□□□□□ -0.19
CTSA-210ENST00000606000 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 MOXD1Q6UVY6 613 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 B3GNT9Q6UX72 402 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
CTSA-210ENST00000606000 WASF1Q92558 559 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 GINS2Q9Y248 185 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 NLRC5Q86WI3 1866 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 EVPLQ92817 2033 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 CHD9Q3L8U1 2897 aa13.88□□□□□ -0.19
CTSA-210ENST00000606000 LINC01553A4QN01 128 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 BTBD18B2RXH4 712 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 EML1O00423 815 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 CCNT1O60563 726 aaKnown RBP13.87□□□□□ -0.19
CTSA-210ENST00000606000 MMP1P03956 469 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 VTNP04004 478 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 OATP04181 439 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 CLCN3P51790 818 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 JAK3P52333 1124 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 IER5Q5VY09 327 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 MIER3Q7Z3K6 550 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTSA-210ENST00000606000 KIAA0319LQ8IZA0 1049 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 MICALL1Q8N3F8 863 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 BANK1Q8NDB2 785 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 GDPD5Q8WTR4 605 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 TMEM40Q8WWA1 233 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 APBB2Q92870 758 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
CTSA-210ENST00000606000 RAD9AQ99638 391 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
CTSA-210ENST00000606000 KCNMB3Q9NPA1 279 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 VAV3Q9UKW4 847 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
CTSA-210ENST00000606000 ARID2Q68CP9 1835 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 M0QZ92 97 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 SFNP31947 248 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
CTSA-210ENST00000606000 HTRA4P83105 476 aaPredicted RBP13.86□□□□□ -0.19
CTSA-210ENST00000606000 DIS3L2Q8IYB7 885 aaKnown RBP13.86□□□□□ -0.19
CTSA-210ENST00000606000 LRRC71Q8N4P6 559 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 HAS1Q92839 578 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 TOP1MTQ969P6 601 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 ZNF668Q96K58 619 aaPredicted RBP13.86□□□□□ -0.19
CTSA-210ENST00000606000 C17orf80Q9BSJ5 609 aa13.86□□□□□ -0.19
CTSA-210ENST00000606000 SEPT9Q9UHD8 586 aaPredicted RBP13.86□□□□□ -0.19
CTSA-210ENST00000606000 LPXNO60711 386 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 STBD1O95210 358 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 GRB10Q13322 594 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 DRP2Q13474 957 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 KIZQ2M2Z5 673 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 PLA2G4FQ68DD2 849 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 RTN4RL1Q86UN2 441 aaPredicted RBP13.85□□□□□ -0.19
CTSA-210ENST00000606000 METTL13Q8N6R0 699 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 LINC01465Q8N7H1 131 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
CTSA-210ENST00000606000 FAM167AQ96KS9 214 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 OSMRQ99650 979 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 WRAP73Q9P2S5 460 aaPredicted RBP13.85□□□□□ -0.19
CTSA-210ENST00000606000 PADI3Q9ULW8 664 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 NOC2LQ9Y3T9 749 aaKnown RBP13.85□□□□□ -0.19
CTSA-210ENST00000606000 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
CTSA-210ENST00000606000 RALGAPA2Q2PPJ7 1873 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 ENPP3O14638 875 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 MGEA5O60502 916 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 CD2BP2O95400 341 aaKnown RBP13.84□□□□□ -0.19
CTSA-210ENST00000606000 GCFC2P16383 781 aaKnown RBP13.84□□□□□ -0.19
CTSA-210ENST00000606000 IBSPP21815 317 aaPredicted RBP13.84□□□□□ -0.19
CTSA-210ENST00000606000 PAK2Q13177 524 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 MTERF2Q49AM1 385 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 EFCAB12Q6NXP0 572 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 RDM1Q8NG50 284 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 YME1L1Q96TA2 773 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 BRMS1Q9HCU9 246 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 CEP131Q9UPN4 1083 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 INSL6Q9Y581 213 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 MTCH2Q9Y6C9 303 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 CHD7Q9P2D1 2997 aa13.84□□□□□ -0.19
CTSA-210ENST00000606000 GPR32O75388 356 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 RPLP2P05387 115 aaKnown RBP13.83□□□□□ -0.2
CTSA-210ENST00000606000 ERVK-21P61565 698 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 NFX1Q12986 1120 aaKnown RBP13.83□□□□□ -0.2
CTSA-210ENST00000606000 PPP2R5CQ13362 524 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 TRIM29Q14134 588 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 TARBP2Q15633 366 aaKnown RBP13.83□□□□□ -0.2
CTSA-210ENST00000606000 NCAPH2Q6IBW4 605 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 NME8Q8N427 588 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms