RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 MRPL42Q9Y6G3 142 aaKnown RBP20.66■□□□□ 0.9
CCDC12-213ENST00000605875 NFASCO94856 1347 aa20.66■□□□□ 0.9
CCDC12-213ENST00000605875 ARP10275 920 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 GTF2F1P35269 517 aaKnown RBP eCLIP20.65■□□□□ 0.93e-7■■■□□ 14.9
CCDC12-213ENST00000605875 PAK2Q13177 524 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 STK3Q13188 491 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 CMTR2Q8IYT2 770 aaKnown RBP20.65■□□□□ 0.9
CCDC12-213ENST00000605875 CRIPAKQ8N1N5 446 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 RASGRP4Q8TDF6 673 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 P2RX5Q93086 422 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 CELF4Q9BZC1 486 aaKnown RBP20.65■□□□□ 0.9
CCDC12-213ENST00000605875 C6orf50Q9HD87 102 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 PDRG1Q9NUG6 133 aa20.65■□□□□ 0.9
CCDC12-213ENST00000605875 KIAA1671Q9BY89 1806 aa20.64■□□□□ 0.9
CCDC12-213ENST00000605875 IGSF9BQ9UPX0 1349 aa20.64■□□□□ 0.89
CCDC12-213ENST00000605875 MBTPS2O43462 519 aa20.64■□□□□ 0.89
CCDC12-213ENST00000605875 STAG3L1P0CL83 205 aa20.64■□□□□ 0.89
CCDC12-213ENST00000605875 ITGB3BPQ13352 177 aaPredicted RBP20.64■□□□□ 0.89
CCDC12-213ENST00000605875 CAMK1Q14012 370 aa20.64■□□□□ 0.89
CCDC12-213ENST00000605875 SMAD2Q15796 467 aaKnown RBP20.64■□□□□ 0.89
CCDC12-213ENST00000605875 PAN2Q504Q3 1202 aaKnown RBP20.64■□□□□ 0.89
CCDC12-213ENST00000605875 NAALADL2Q58DX5 795 aa20.64■□□□□ 0.89
CCDC12-213ENST00000605875 CCDC148Q8NFR7 591 aa20.64■□□□□ 0.89
CCDC12-213ENST00000605875 AGO4Q9HCK5 861 aaKnown RBP20.64■□□□□ 0.89
CCDC12-213ENST00000605875 SMIM35A0A1B0GVV1 85 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 LINC01565O15544 149 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 ATG7O95352 703 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 ZNF76P36508 570 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 KRT76Q01546 638 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 MTHFD1LQ6UB35 978 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 NME8Q8N427 588 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 LRFN2Q9ULH4 789 aa20.63■□□□□ 0.89
CCDC12-213ENST00000605875 KDM3AQ9Y4C1 1321 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 FAM86B1E9PN63 330 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 CPLX1O14810 134 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 TBX10O75333 385 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 ITGB1P05556 798 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 FAM86B2P0C5J1 330 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 DNAJB1P25685 340 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 GNA11P29992 359 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 IRS1P35568 1242 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 ADAM15Q13444 863 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 SMAD4Q13485 552 aaKnown RBP20.62■□□□□ 0.89
CCDC12-213ENST00000605875 TRIM22Q8IYM9 498 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 KLHL23Q8NBE8 558 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 SPPL3Q8TCT6 385 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 PPP2R3CQ969Q6 453 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 ZNF274Q96GC6 653 aaPredicted RBP20.62■□□□□ 0.89
CCDC12-213ENST00000605875 CD207Q9UJ71 328 aa20.62■□□□□ 0.89
CCDC12-213ENST00000605875 DDX39AO00148 427 aaKnown RBP20.61■□□□□ 0.89
CCDC12-213ENST00000605875 MEIS1O00470 390 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 KLRC1P26715 233 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 SLC26A2P50443 739 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 SSRP1Q08945 709 aaKnown RBP20.61■□□□□ 0.89
CCDC12-213ENST00000605875 NFX1Q12986 1120 aaKnown RBP20.61■□□□□ 0.89
CCDC12-213ENST00000605875 TMEM266Q2M3C6 531 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 PLA2G4DQ86XP0 818 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 BICD2Q8TD16 824 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 CRYGNQ8WXF5 182 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 POP1Q99575 1024 aaKnown RBP20.61■□□□□ 0.89
CCDC12-213ENST00000605875 TMX1Q9H3N1 280 aa20.61■□□□□ 0.89
CCDC12-213ENST00000605875 IGLV3-22A0A075B6J6 115 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 IGKV6D-21A0A0A0MT36 114 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 BACH1O14867 736 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 HBP1O60381 514 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 IBSPP21815 317 aaPredicted RBP20.6■□□□□ 0.89
CCDC12-213ENST00000605875 NDUFV1P49821 464 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 GATMP50440 423 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 FAM160B1Q5W0V3 765 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 NIPA1Q7RTP0 329 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 ADGRD2Q7Z7M1 963 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 POF1BQ8WVV4 589 aa20.6■□□□□ 0.89
CCDC12-213ENST00000605875 CCNE2O96020 404 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 CYP3A4P08684 503 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 SARSP49591 514 aaKnown RBP20.59■□□□□ 0.89
CCDC12-213ENST00000605875 ANAPC15P60006 121 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 MCTP2Q6DN12 878 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 ABHD15Q6UXT9 468 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 AIFM3Q96NN9 605 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 GINS2Q9Y248 185 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 PCDHB7Q9Y5E2 793 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 MUC6Q6W4X9 2439 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 EVPLQ92817 2033 aa20.59■□□□□ 0.89
CCDC12-213ENST00000605875 RPS6KA5O75582 802 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 DEXIO95424 95 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 NLRP5P59047 1200 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 SETQ01105 290 aaPredicted RBP20.58■□□□□ 0.89
CCDC12-213ENST00000605875 SCRN1Q12765 414 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 CPLX2Q6PUV4 134 aaKnown RBP20.58■□□□□ 0.89
CCDC12-213ENST00000605875 EFHBQ8N7U6 833 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 ATP8B4Q8TF62 1192 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 MSLNLQ96KJ4 702 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 CDHR5Q9HBB8 845 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 ERVK-5Q9HDB9 667 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 ZNF302Q9NR11 478 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 SH3GLB2Q9NR46 395 aa20.58■□□□□ 0.89
CCDC12-213ENST00000605875 NOC2LQ9Y3T9 749 aaKnown RBP20.58■□□□□ 0.89
CCDC12-213ENST00000605875 PLXNA4Q9HCM2 1894 aa20.58■□□□□ 0.88
CCDC12-213ENST00000605875 MGEA5O60502 916 aa20.57■□□□□ 0.88
CCDC12-213ENST00000605875 EYA4O95677 639 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms