RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 FTOQ9C0B1 505 aaKnown RBP eCLIP17.53■□□□□ 0.4
LINC00221-201ENST00000603633 TFIP11Q9UBB9 837 aaKnown RBP17.53■□□□□ 0.4
LINC00221-201ENST00000603633 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
LINC00221-201ENST00000603633 ZBTB42B2RXF5 422 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 H0YGN5 161 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 SPTLC2O15270 562 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 SYN1P17600 705 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 MARCKSP29966 332 aaPredicted RBP17.52■□□□□ 0.4
LINC00221-201ENST00000603633 UBA7P41226 1012 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 KRT85P78386 507 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.4
LINC00221-201ENST00000603633 PPP1R12CQ9BZL4 782 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 NT5C3AQ9H0P0 336 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 CYP26B1Q9NR63 512 aa17.52■□□□□ 0.4
LINC00221-201ENST00000603633 WRAP73Q9P2S5 460 aaPredicted RBP17.52■□□□□ 0.4
LINC00221-201ENST00000603633 SCN10AQ9Y5Y9 1956 aa17.52■□□□□ 0.39
LINC00221-201ENST00000603633 MED24O75448 989 aa17.52■□□□□ 0.39
LINC00221-201ENST00000603633 CKBP12277 381 aa17.52■□□□□ 0.39
LINC00221-201ENST00000603633 SELPP16109 830 aa17.52■□□□□ 0.39
LINC00221-201ENST00000603633 RFC2P35250 354 aa17.52■□□□□ 0.39
LINC00221-201ENST00000603633 THPOP40225 353 aa17.52■□□□□ 0.39
LINC00221-201ENST00000603633 FOXD4L6Q3SYB3 417 aaPredicted RBP17.52■□□□□ 0.39
LINC00221-201ENST00000603633 MTERF2Q49AM1 385 aa17.52■□□□□ 0.39
LINC00221-201ENST00000603633 FOXD4L3Q6VB84 417 aaPredicted RBP17.52■□□□□ 0.39
LINC00221-201ENST00000603633 FBXO2Q9UK22 296 aaPredicted RBP17.52■□□□□ 0.39
LINC00221-201ENST00000603633 GAS2O43903 313 aaKnown RBP17.51■□□□□ 0.39
LINC00221-201ENST00000603633 C22orf31O95567 290 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 TXLNAP40222 546 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 RFC5P40937 340 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 DNM2P50570 870 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 CDC42EP1Q00587 391 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 DNM1Q05193 864 aaKnown RBP17.51■□□□□ 0.39
LINC00221-201ENST00000603633 TRIM71Q2Q1W2 868 aaKnown RBP17.51■□□□□ 0.39
LINC00221-201ENST00000603633 XKR9Q5GH70 373 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 IER5Q5VY09 327 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 METTL13Q8N6R0 699 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 TRAPPC12Q8WVT3 735 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 SLC7A3Q8WY07 619 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 DHX38Q92620 1227 aaKnown RBP17.51■□□□□ 0.39
LINC00221-201ENST00000603633 CALML4Q96GE6 196 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 CDK5RAP3Q96JB5 506 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 MAP7D2Q96T17 732 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 DBR1Q9UK59 544 aaKnown RBP17.51■□□□□ 0.39
LINC00221-201ENST00000603633 DNM3Q9UQ16 869 aa17.51■□□□□ 0.39
LINC00221-201ENST00000603633 M0QZ92 97 aa17.5■□□□□ 0.39
LINC00221-201ENST00000603633 MAFO75444 373 aaPredicted RBP17.5■□□□□ 0.39
LINC00221-201ENST00000603633 CYP2C18P33260 490 aa17.5■□□□□ 0.39
LINC00221-201ENST00000603633 PPIGQ13427 754 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00221-201ENST00000603633 HYIQ5T013 277 aa17.5■□□□□ 0.39
LINC00221-201ENST00000603633 RPUSD2Q8IZ73 545 aaKnown RBP17.5■□□□□ 0.39
LINC00221-201ENST00000603633 BADQ92934 168 aa17.5■□□□□ 0.39
LINC00221-201ENST00000603633 KIAA1024Q9UPX6 916 aa17.5■□□□□ 0.39
LINC00221-201ENST00000603633 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 IQCF3P0C7M6 154 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 POLGP54098 1239 aaPredicted RBP17.49■□□□□ 0.39
LINC00221-201ENST00000603633 FPGSQ05932 587 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 PLA2G4FQ68DD2 849 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 EFCAB12Q6NXP0 572 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 POTEGQ6S5H5 508 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 RUFY4Q6ZNE9 571 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 LRRC8DQ7L1W4 858 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 CABP7Q86V35 215 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 ZNF579Q8NAF0 562 aaKnown RBP17.49■□□□□ 0.39
LINC00221-201ENST00000603633 DNAJB3Q8WWF6 145 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 CCSER1Q9C0I3 900 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 SCAND2PQ9GZW5 306 aaPredicted RBP17.49■□□□□ 0.39
LINC00221-201ENST00000603633 CSRNP2Q9H175 543 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 RCOR1Q9UKL0 485 aa17.49■□□□□ 0.39
LINC00221-201ENST00000603633 IGKV6-21A0A0C4DH24 114 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 PP2D1A8MPX8 630 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 DGAT1O75907 488 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 PFKMP08237 780 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 ITGB8P26012 769 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 CDC25AP30304 524 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 RARRES1P49788 294 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 CCL23P55773 120 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 FAM26DQ5JW98 314 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 PRPF38BQ5VTL8 546 aaKnown RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 RASSF8Q8NHQ8 419 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 PIGOQ8TEQ8 1089 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 CEP89Q96ST8 783 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 MMTAG2Q9BU76 263 aaKnown RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 FAM49AQ9H0Q0 323 aaPredicted RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 DHX33Q9H6R0 707 aaKnown RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 DDX19AQ9NUU7 478 aaKnown RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 CCDC39Q9UFE4 941 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 CUTAO60888 179 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 MAGEA10P43363 369 aaPredicted RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 NPEPPSP55786 919 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 ZNF618Q5T7W0 954 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 KIAA0319LQ8IZA0 1049 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 WNT8BQ93098 351 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
LINC00221-201ENST00000603633 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
LINC00221-201ENST00000603633 ARHGEF35A5YM69 484 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms