RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PCDHA2Q9Y5H9 948 aa19.94■□□□□ 0.78
VRK3-225ENST00000601912 RSPH10B2B2RC85 870 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 NKRFO15226 690 aaKnown RBP eCLIP19.93■□□□□ 0.78
VRK3-225ENST00000601912 AP5Z1O43299 807 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 USO1O60763 962 aaKnown RBP19.93■□□□□ 0.78
VRK3-225ENST00000601912 STBD1O95210 358 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 OATP04181 439 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 RSPH10BP0C881 870 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 ADCYAP1R1P41586 468 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 PSMC4P43686 418 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 NPEPPSP55786 919 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 KIF22Q14807 665 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 PLA2G4FQ68DD2 849 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 PPP1R9BQ96SB3 815 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 HSD3B7Q9H2F3 369 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 MRPL44Q9H9J2 332 aaKnown RBP19.93■□□□□ 0.78
VRK3-225ENST00000601912 OLFML3Q9NRN5 406 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 NRBP2Q9NSY0 501 aa19.93■□□□□ 0.78
VRK3-225ENST00000601912 MYH9P35579 1960 aaKnown RBP19.93■□□□□ 0.78
VRK3-225ENST00000601912 WDR81Q562E7 1941 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 TMEM150BA6NC51 233 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 HIP1RO75146 1068 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 ZNF131P52739 623 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 GLG1Q92896 1179 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 EMID1Q96A84 441 aaPredicted RBP19.92■□□□□ 0.78
VRK3-225ENST00000601912 PDLIM2Q96JY6 352 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 FAM167AQ96KS9 214 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 DRC1Q96MC2 740 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 CYP26B1Q9NR63 512 aa19.92■□□□□ 0.78
VRK3-225ENST00000601912 SFI1A8K8P3 1242 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 LGR5O75473 907 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 DGAT1O75907 488 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 TBC1D8O95759 1140 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 ARHGAP1Q07960 439 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 LRRC41Q15345 812 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 DUSP28Q4G0W2 176 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 PLPPR4Q7Z2D5 763 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 TRIM47Q96LD4 638 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 PCYT2Q99447 389 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 SH2D3AQ9BRG2 576 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 CFHR5Q9BXR6 569 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 LARSQ9P2J5 1176 aaKnown RBP19.91■□□□□ 0.78
VRK3-225ENST00000601912 SERPINC1P01008 464 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 ZNF18P17022 549 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 VEGFBP49765 207 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 SLC26A2P50443 739 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 ZNF75DP51815 510 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 SP3Q02447 781 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 CCDC144BQ3MJ40 725 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 ODR4Q5SWX8 454 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 TMEM63BQ5T3F8 832 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 CENPPQ6IPU0 288 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 STXBP4Q6ZWJ1 553 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 MAEAQ7L5Y9 396 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 NOC3LQ8WTT2 800 aaKnown RBP19.91■□□□□ 0.78
VRK3-225ENST00000601912 TSG101Q99816 390 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 NIFKQ9BYG3 293 aaKnown RBP19.91■□□□□ 0.78
VRK3-225ENST00000601912 SMARCAD1Q9H4L7 1026 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 POLD4Q9HCU8 107 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 SAMSN1Q9NSI8 373 aaKnown RBP19.91■□□□□ 0.78
VRK3-225ENST00000601912 FLRT1Q9NZU1 646 aa19.91■□□□□ 0.78
VRK3-225ENST00000601912 EMSYQ7Z589 1322 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 TRIM49BA6NDI0 452 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 XRCC5P13010 732 aaKnown RBP19.9■□□□□ 0.78
VRK3-225ENST00000601912 ATP1A3P13637 1013 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 ATP4AP20648 1035 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 CTGFP29279 349 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 PMS1P54277 932 aaKnown RBP19.9■□□□□ 0.78
VRK3-225ENST00000601912 FANCCQ00597 558 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 LRRC63Q05C16 580 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 TTI2Q6NXR4 508 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 FAM178BQ8IXR5 827 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 MCPH1Q8NEM0 835 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 PPTC7Q8NI37 304 aa19.9■□□□□ 0.78
VRK3-225ENST00000601912 GCNT3O95395 438 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 SMPD1P17405 629 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 TNFAIP2Q03169 654 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 MAPK7Q13164 816 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 CCL14Q16627 93 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 MTERF2Q49AM1 385 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 FAM102BQ5T8I3 360 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 ANKRD40Q6AI12 368 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 FOXR2Q6PJQ5 311 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 CSGALNACT2Q8N6G5 542 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 GLIS3Q8NEA6 775 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 ANKRD20A12PQ8NF67 263 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 SCFD1Q8WVM8 642 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 BBXQ8WY36 941 aaPredicted RBP19.89■□□□□ 0.77
VRK3-225ENST00000601912 SEMA6BQ9H3T3 888 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 ATP6V0A4Q9HBG4 840 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 RNF186Q9NXI6 227 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 PPME1Q9Y570 386 aa19.89■□□□□ 0.77
VRK3-225ENST00000601912 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.88■□□□□ 0.77
VRK3-225ENST00000601912 CBFA2T2O43439 604 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 TRPA1O75762 1119 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 FGFR1OPO95684 399 aaKnown RBP19.88■□□□□ 0.77
VRK3-225ENST00000601912 PLS3P13797 630 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 CYP2C19P33261 490 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 SPAG1Q07617 926 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 HSP90AA4PQ58FG1 418 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms