RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ABHD14A-ACY1A0A1B0GW23 586 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 DDX11L8A8MPP1 907 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 EFCAB14O75071 495 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 STBD1O95210 358 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 OR52Z1P0C646 297 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 IKBKEQ14164 716 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 FAM109BQ6ICB4 259 aaPredicted RBP18.91■□□□□ 0.62
TRIM28-215ENST00000601150 DBF4BQ8NFT6 615 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 SEPT8Q92599 483 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 TRPV2Q9Y5S1 764 aa18.91■□□□□ 0.62
TRIM28-215ENST00000601150 GRXCR1A8MXD5 290 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 ATP2A2P16615 1042 aaKnown RBP18.9■□□□□ 0.62
TRIM28-215ENST00000601150 PDCP20941 246 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 KCNJ6P48051 423 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 TOB1P50616 345 aaPredicted RBP18.9■□□□□ 0.62
TRIM28-215ENST00000601150 TMEM62Q0P6H9 643 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 NBR1Q14596 966 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 TARBP2Q15633 366 aaKnown RBP18.9■□□□□ 0.62
TRIM28-215ENST00000601150 TCTN1Q2MV58 587 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 KIAA0319LQ8IZA0 1049 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 METTL13Q8N6R0 699 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 DYDC2Q96IM9 177 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 SLC9A7Q96T83 725 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 LXNQ9BS40 222 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 OSBPL7Q9BZF2 842 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 RGL1Q9NZL6 768 aa18.9■□□□□ 0.62
TRIM28-215ENST00000601150 GHRP10912 638 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 TMOD1P28289 359 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 WDR5P61964 334 aaKnown RBP18.89■□□□□ 0.61
TRIM28-215ENST00000601150 TBC1D8BQ0IIM8 1120 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 LPIN1Q14693 890 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 MTERF2Q49AM1 385 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 RILPL1Q5EBL4 403 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 FBXO47Q5MNV8 452 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 EFCAB12Q6NXP0 572 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 ANO5Q75V66 913 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 HSCBQ8IWL3 235 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 C4orf19Q8IY42 314 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 PHOSPHO2Q8TCD6 241 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 NEK9Q8TD19 979 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 APBB2Q92870 758 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 EIF2AK1Q9BQI3 630 aaKnown RBP18.89■□□□□ 0.61
TRIM28-215ENST00000601150 IFIH1Q9BYX4 1025 aaKnown RBP18.89■□□□□ 0.61
TRIM28-215ENST00000601150 CELF4Q9BZC1 486 aaKnown RBP18.89■□□□□ 0.61
TRIM28-215ENST00000601150 ZSWIM4Q9H7M6 989 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 WRAP73Q9P2S5 460 aaPredicted RBP18.89■□□□□ 0.61
TRIM28-215ENST00000601150 PCDHB6Q9Y5E3 794 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 SQORQ9Y6N5 450 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 KDM3AQ9Y4C1 1321 aa18.89■□□□□ 0.61
TRIM28-215ENST00000601150 TMEM150BA6NC51 233 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 DNAJB2P25686 324 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 CYP4A11Q02928 519 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 CTTNQ14247 550 aaKnown RBP18.88■□□□□ 0.61
TRIM28-215ENST00000601150 RAB30Q15771 203 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 TSHZ1Q6ZSZ6 1077 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 LINC01465Q8N7H1 131 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 C4orf32Q8N8J7 132 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 USP38Q8NB14 1042 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 LAMA3Q16787 3333 aa18.88■□□□□ 0.61
TRIM28-215ENST00000601150 VPS37CA5D8V6 355 aaPredicted RBP18.87■□□□□ 0.61
TRIM28-215ENST00000601150 POTEMA6NI47 508 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 SLITRK3O94933 977 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 PBX2P40425 430 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 TECP42680 631 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 CLCN3P51790 818 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 PTGDRQ13258 359 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 TMEM266Q2M3C6 531 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 PLA2G4FQ68DD2 849 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 OTUD6AQ7L8S5 288 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 TPH2Q8IWU9 490 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 LRRC71Q8N4P6 559 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 DEFB123Q8N688 67 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 CEP89Q96ST8 783 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 MAP7D2Q96T17 732 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 HSD17B14Q9BPX1 270 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 PBX4Q9BYU1 374 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 SUGCTQ9HAC7 445 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 CYP26B1Q9NR63 512 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 MSRAQ9UJ68 235 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 PPME1Q9Y570 386 aa18.87■□□□□ 0.61
TRIM28-215ENST00000601150 TMEM265A0A087WTH1 108 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 RBAK-RBAKDNI3L0D1 243 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 LAD1O00515 517 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 VTNP04004 478 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 YWHABP31946 246 aaKnown RBP18.86■□□□□ 0.61
TRIM28-215ENST00000601150 MKRN4PQ13434 485 aaPredicted RBP18.86■□□□□ 0.61
TRIM28-215ENST00000601150 ZNF697Q5TEC3 545 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 BRAPQ7Z569 592 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 HERC6Q8IVU3 1022 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 ZNF710Q8N1W2 664 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 TIFAQ96CG3 184 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 CEP170P1Q96L14 293 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 JPH2Q9BR39 696 aaPredicted RBP18.86■□□□□ 0.61
TRIM28-215ENST00000601150 SH2D3AQ9BRG2 576 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.86■□□□□ 0.61
TRIM28-215ENST00000601150 FOXD4L1Q9NU39 408 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 AKT3Q9Y243 479 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 GINS2Q9Y248 185 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 PCDHA11Q9Y5I1 949 aa18.86■□□□□ 0.61
TRIM28-215ENST00000601150 LYPLA2O95372 231 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms