RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 KCNC3Q14003 757 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 PTPN21Q16825 1174 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 NFXL1Q6ZNB6 911 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 THNSL1Q8IYQ7 743 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 COLGALT1Q8NBJ5 622 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 EXOC6Q8TAG9 804 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 MAP4K1Q92918 833 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 ADAM2Q99965 735 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 TYW1Q9NV66 732 aaKnown RBP19.16■□□□□ 0.66
USE1-208ENST00000600970 TMEM260Q9NX78 707 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 GINS2Q9Y248 185 aa19.16■□□□□ 0.66
USE1-208ENST00000600970 DENND3A2RUS2 1198 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 CCDC69A6NI79 296 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 C9IYK1 514 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 SGSM2O43147 1006 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 PRC1O43663 620 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 RPS6KA5O75582 802 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 ATG7O95352 703 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 PDE12Q6L8Q7 609 aaKnown RBP19.15■□□□□ 0.66
USE1-208ENST00000600970 TMEM184AQ6ZMB5 413 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 FAM43BQ6ZT52 329 aaPredicted RBP19.15■□□□□ 0.66
USE1-208ENST00000600970 TMTC2Q8N394 836 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 CCDC82Q8N4S0 544 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 TMEM40Q8WWA1 233 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 S1PR5Q9H228 398 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 CWH43Q9H720 699 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 C1orf112Q9NSG2 853 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
USE1-208ENST00000600970 RBM8AQ9Y5S9 174 aaKnown RBP19.15■□□□□ 0.66
USE1-208ENST00000600970 EVPLQ92817 2033 aa19.15■□□□□ 0.66
USE1-208ENST00000600970 IGKV6D-21A0A0A0MT36 114 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 SH2B2O14492 632 aaPredicted RBP19.14■□□□□ 0.65
USE1-208ENST00000600970 GFRA3O60609 400 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 SLC26A2P50443 739 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 ITGB3BPQ13352 177 aaPredicted RBP19.14■□□□□ 0.65
USE1-208ENST00000600970 PLPP4Q5VZY2 271 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 ANKRD54Q6NXT1 300 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 SLC24A5Q71RS6 500 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 HEATR3Q7Z4Q2 680 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 RAB11FIP4Q86YS3 637 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 KIAA0319LQ8IZA0 1049 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 TMEM87BQ96K49 555 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 ST3GAL5Q9UNP4 418 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 PLXNA3P51805 1871 aa19.14■□□□□ 0.65
USE1-208ENST00000600970 HBP1O60381 514 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 SRGAP2BP0DMP2 458 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 CALM1P0DP23 149 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 CALM2P0DP24 149 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 CALM3P0DP25 149 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 TECP42680 631 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 APOBRQ0VD83 1088 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 COL9A3Q14050 684 aaPredicted RBP19.13■□□□□ 0.65
USE1-208ENST00000600970 ODR4Q5SWX8 454 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 SYCE2Q6PIF2 218 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 RASGRP4Q8TDF6 673 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 PGBD1Q96JS3 809 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 APOL5Q9BWW9 433 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 IRF2BPLQ9H1B7 796 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 AGO4Q9HCK5 861 aaKnown RBP19.13■□□□□ 0.65
USE1-208ENST00000600970 LZTS1Q9Y250 596 aa19.13■□□□□ 0.65
USE1-208ENST00000600970 GPR182O15218 404 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 FGFR1P11362 822 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 LAG3P18627 525 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 MCM5P33992 734 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 LIFRP42702 1097 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 FAM189BP81408 668 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 PLCB3Q01970 1234 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 TMTC3Q6ZXV5 915 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 MRPS27Q92552 414 aaKnown RBP19.12■□□□□ 0.65
USE1-208ENST00000600970 ATOH1Q92858 354 aaPredicted RBP19.12■□□□□ 0.65
USE1-208ENST00000600970 ATP6V0A4Q9HBG4 840 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 TMEM161AQ9NX61 479 aa19.12■□□□□ 0.65
USE1-208ENST00000600970 COL1A2P08123 1366 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 CCNE2O96020 404 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 PDGFBP01127 241 aaPredicted RBP19.11■□□□□ 0.65
USE1-208ENST00000600970 SP100P23497 879 aaPredicted RBP19.11■□□□□ 0.65
USE1-208ENST00000600970 CEP55Q53EZ4 464 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 LLGL2Q6P1M3 1020 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 ABHD15Q6UXT9 468 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 FAM228AQ86W67 206 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 FANCBQ8NB91 859 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 RIPOR3Q96MK2 946 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 PPP1R16BQ96T49 567 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 TCF25Q9BQ70 676 aa19.11■□□□□ 0.65
USE1-208ENST00000600970 ELAC1Q9H777 363 aaKnown RBP19.11■□□□□ 0.65
USE1-208ENST00000600970 HIDE1A8MVS5 230 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 ZBTB42B2RXF5 422 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
USE1-208ENST00000600970 MEIS1O00470 390 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 BACH1O14867 736 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 CRYBB1P53674 252 aaPredicted RBP19.1■□□□□ 0.65
USE1-208ENST00000600970 DSC3Q14574 896 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 ZNF484Q5JVG2 852 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 FAM160B1Q5W0V3 765 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 WWC2Q6AWC2 1192 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 TYW1BQ6NUM6 668 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 LRRC55Q6ZSA7 311 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 ZBTB33Q86T24 672 aa19.1■□□□□ 0.65
USE1-208ENST00000600970 CCDC60Q8IWA6 550 aaPredicted RBP19.1■□□□□ 0.65
USE1-208ENST00000600970 OSMRQ99650 979 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms