RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 EML1O00423 815 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 WNT7AO00755 349 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 CHMP2AO43633 222 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 GJB5O95377 273 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 OATP04181 439 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 FOSBP53539 338 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 PRKCEQ02156 737 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 TARBP2Q15633 366 aaKnown RBP10.93□□□□□ -0.66
VRK3-215ENST00000599138 IER5Q5VY09 327 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.93□□□□□ -0.66
VRK3-215ENST00000599138 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 APBB2Q92870 758 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 TMX3Q96JJ7 454 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 CEP89Q96ST8 783 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 BACH2Q9BYV9 841 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 IFIH1Q9BYX4 1025 aaKnown RBP10.93□□□□□ -0.66
VRK3-215ENST00000599138 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
VRK3-215ENST00000599138 SLC28A3Q9HAS3 691 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 CEP131Q9UPN4 1083 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 A0A0C4DFX4 3053 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 MYO7AQ13402 2215 aa10.93□□□□□ -0.66
VRK3-215ENST00000599138 MAGEB2O15479 319 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 GHRP10912 638 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 MCM2P49736 904 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 GUCY1B3Q02153 619 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 SAFBQ15424 915 aaKnown RBP eCLIP10.92□□□□□ -0.66
VRK3-215ENST00000599138 XKR3Q5GH77 459 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 TSHZ1Q6ZSZ6 1077 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
VRK3-215ENST00000599138 CKAP2LQ8IYA6 745 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 SLFN12Q8IYM2 578 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 USP38Q8NB14 1042 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 NIFKQ9BYG3 293 aaKnown RBP10.92□□□□□ -0.66
VRK3-215ENST00000599138 CELF4Q9BZC1 486 aaKnown RBP10.92□□□□□ -0.66
VRK3-215ENST00000599138 AGO3Q9H9G7 860 aaKnown RBP10.92□□□□□ -0.66
VRK3-215ENST00000599138 TRPV2Q9Y5S1 764 aa10.92□□□□□ -0.66
VRK3-215ENST00000599138 PRUNE2Q8WUY3 3088 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 KIF28PB7ZC32 967 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 ARHGEF15O94989 841 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 AMHP03971 560 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 CA3P07451 260 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 PSMC5P62195 406 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 HTRA4P83105 476 aaPredicted RBP10.91□□□□□ -0.66
VRK3-215ENST00000599138 TMEM62Q0P6H9 643 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 EPHA7Q15375 998 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 FAM43BQ6ZT52 329 aaPredicted RBP10.91□□□□□ -0.66
VRK3-215ENST00000599138 FAM184AQ8NB25 1140 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 MYLIPQ8WY64 445 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 MTMR9Q96QG7 549 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 RAD9AQ99638 391 aa10.91□□□□□ -0.66
VRK3-215ENST00000599138 IGKV6-21A0A0C4DH24 114 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 M0QZ92 97 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 ENPP3O14638 875 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 TLL1O43897 1013 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 GPR32O75388 356 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 BAG4O95429 457 aaKnown RBP10.9□□□□□ -0.66
VRK3-215ENST00000599138 P4HBP07237 508 aaKnown RBP10.9□□□□□ -0.66
VRK3-215ENST00000599138 U2AF2P26368 475 aaKnown RBP eCLIP10.9□□□□□ -0.66
VRK3-215ENST00000599138 CD52P31358 61 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 QARSP47897 775 aaKnown RBP10.9□□□□□ -0.66
VRK3-215ENST00000599138 TAP1Q03518 808 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 ORC2Q13416 577 aaPredicted RBP10.9□□□□□ -0.66
VRK3-215ENST00000599138 CALCRLQ16602 461 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 EFCAB12Q6NXP0 572 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 ANO5Q75V66 913 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 TRMT1LQ7Z2T5 733 aaKnown RBP10.9□□□□□ -0.66
VRK3-215ENST00000599138 NOSTRINQ8IVI9 506 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 ZNF710Q8N1W2 664 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 BANK1Q8NDB2 785 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
VRK3-215ENST00000599138 TMEM40Q8WWA1 233 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 TMEM60Q9H2L4 133 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 PRDM12Q9H4Q4 367 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 CDHR5Q9HBB8 845 aa10.9□□□□□ -0.66
VRK3-215ENST00000599138 WRAP73Q9P2S5 460 aaPredicted RBP10.9□□□□□ -0.66
VRK3-215ENST00000599138 EYSQ5T1H1 3165 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 LCHNA4D1U4 455 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 TMEM150BA6NC51 233 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 NEMFO60524 1076 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 FOSL2P15408 326 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 CLCN3P51790 818 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 CRYBB1P53674 252 aaPredicted RBP10.89□□□□□ -0.67
VRK3-215ENST00000599138 ADGRE1Q14246 886 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 RTN4RL1Q86UN2 441 aaPredicted RBP10.89□□□□□ -0.67
VRK3-215ENST00000599138 C4orf19Q8IY42 314 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 CRIPAKQ8N1N5 446 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 METTL13Q8N6R0 699 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 LINC01599Q8WXQ3 324 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 ZBED2Q9BTP6 218 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 FTHL17Q9BXU8 183 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 ADAMTS10Q9H324 1103 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 TMX1Q9H3N1 280 aa10.89□□□□□ -0.67
VRK3-215ENST00000599138 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms