RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 PDXKO00764 312 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 IRF6O14896 467 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 CTIFO43310 598 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 GNA14O95837 355 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 QARSP47897 775 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 KCNMA1Q12791 1236 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 MAPK7Q13164 816 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 MEA1Q16626 185 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 SPRYD7Q5W111 196 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 XRRA1Q6P2D8 792 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 RASAL3Q86YV0 1011 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 NSUN6Q8TEA1 469 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 WDR24Q96S15 920 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 ZMYND15Q9H091 742 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 KCND2Q9NZV8 630 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 ZMYM2Q9UBW7 1377 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 PHLPP2Q6ZVD8 1323 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 TMEM150BA6NC51 233 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 CETN3O15182 167 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 TGFB1I1O43294 461 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 GUCY2CP25092 1073 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 GJA5P36382 358 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 MKRN3Q13064 507 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 PPIL2Q13356 520 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 CYP4F22Q6NT55 531 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 PADI6Q6TGC4 694 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 KSR1Q8IVT5 923 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 INPP4AQ96PE3 977 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 IRX2Q9BZI1 471 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 MMRN2Q9H8L6 949 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 LZTFL1Q9NQ48 299 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 TYW1Q9NV66 732 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 ODF2LQ9ULJ1 636 aa18.78■□□□□ 0.6
SHKBP1-216ENST00000598201 HIP1RO75146 1068 aa18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 ZBTB48P10074 688 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 GRM1Q13255 1194 aa18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 GPRASP2Q96D09 838 aa18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 SH2D3AQ9BRG2 576 aa18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 BTBD7Q9P203 1132 aa18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 REXO2Q9Y3B8 237 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 EPN1Q9Y6I3 576 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-216ENST00000598201 FAM155AB1AL88 458 aaPredicted RBP18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 EIF3DO15371 548 aaKnown RBP eCLIP18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 LYPLA2O95372 231 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 ABL1P00519 1130 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 SLC10A3P09131 477 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 RARRES1P49788 294 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 GNG11P61952 73 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 LBX2Q6XYB7 198 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 MAEAQ7L5Y9 396 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 ZNF720Q7Z2F6 126 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 SEL1LQ9UBV2 794 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 TELO2Q9Y4R8 837 aa18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.77■□□□□ 0.59
SHKBP1-216ENST00000598201 CLIC2O15247 247 aa18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 CALUO43852 315 aaPredicted RBP18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 NDUFA10O95299 355 aa18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 NR3C1P04150 777 aa18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 TSR1Q2NL82 804 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 ODR4Q5SWX8 454 aa18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 GADL1Q6ZQY3 521 aa18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 FAM178BQ8IXR5 827 aa18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 L2HGDHQ9H9P8 463 aa18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 DBR1Q9UK59 544 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-216ENST00000598201 WDR64B1ANS9 1081 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 AKAP3O75969 853 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 KCNA2P16389 499 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 YWHABP31946 246 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 KRT76Q01546 638 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 TRMT1LQ7Z2T5 733 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 CAPNS2Q96L46 248 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 A0A0G2JLL6 359 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 CXCL11O14625 94 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 CASP4P49662 377 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 JAK3P52333 1124 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 UTP14CQ5TAP6 766 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 PRRT2Q7Z6L0 340 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 NLRX1Q86UT6 975 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 KCNH4Q9UQ05 1017 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 LCTP09848 1927 aa18.75■□□□□ 0.59
SHKBP1-216ENST00000598201 BACH1O14867 736 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 SFNP31947 248 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 ARHGAP25P42331 645 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 PSMC5P62195 406 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 RBM10P98175 930 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 CNTN2Q02246 1040 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 NAA30Q147X3 362 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 FRMD5Q7Z6J6 570 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 C4orf19Q8IY42 314 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 ZNF397Q8NF99 534 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 BAP1Q92560 729 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 IQCDQ96DY2 449 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 CRACR2AQ9BSW2 395 aa18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 ZNF215Q9UL58 517 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-216ENST00000598201 MAFGO15525 162 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 USO1O60763 962 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 NOL4O94818 638 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 APBA1Q02410 837 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 KCNH2Q12809 1159 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 SNAPC2Q13487 334 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms