RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GAS2L3Q86XJ1 694 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 C4orf19Q8IY42 314 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 SPATA20Q8TB22 786 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 PIGOQ8TEQ8 1089 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 TRIM9Q9C026 710 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 KATNBL1Q9H079 304 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 SEMA6BQ9H3T3 888 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 FLRT1Q9NZU1 646 aa14.54□□□□□ -0.08
SHKBP1-209ENST00000595803 ZNF236Q9UL36 1845 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 GSTTP1A0A1W2PQM5 241 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 ARHGEF35A5YM69 484 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 NKRFO15226 690 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 CAVIN2O95810 425 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 HMGCRP04035 888 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 ADCYAP1R1P41586 468 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 SLC12A3P55017 1021 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 CCL14Q16627 93 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 ANO6Q4KMQ2 910 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 PRAMEF19Q5SWL8 479 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 MFSD14CQ5VZR4 134 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 FAM160B1Q5W0V3 765 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 DYMQ7RTS9 669 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 GPBP1Q86WP2 473 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 TRMT44Q8IYL2 757 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 DDX12PQ92771 950 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 COPS5Q92905 334 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 CCDC43Q96MW1 224 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 SPATA33Q96N06 139 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 NAT10Q9H0A0 1025 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 BHMT2Q9H2M3 363 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 ZNF302Q9NR11 478 aa14.53□□□□□ -0.08
SHKBP1-209ENST00000595803 PVALEFA0A1B0GWK0 134 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 ZBTB39O15060 712 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 IDEP14735 1019 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 CYP2C19P33261 490 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 STAT5BP51692 787 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 TNFAIP2Q03169 654 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 MORC3Q14149 939 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 KCNB1Q14721 858 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 LRRC26Q2I0M4 334 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 KMT5BQ4FZB7 885 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 CNNM4Q6P4Q7 775 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 GPR20Q99678 358 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 GTPBP4Q9BZE4 634 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 RBSNQ9H1K0 784 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 DNAJC25Q9H1X3 360 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 AZI2Q9H6S1 392 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 HMX1Q9NP08 348 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 NRBP2Q9NSY0 501 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 ANKEF1Q9NU02 776 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 WRAP73Q9P2S5 460 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 DACH1Q9UI36 760 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 DBR1Q9UK59 544 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 OGDHLQ9ULD0 1010 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 TELO2Q9Y4R8 837 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 DOCK3Q8IZD9 2030 aa14.52□□□□□ -0.09
SHKBP1-209ENST00000595803 MCM3APO60318 1980 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 KLRC4O43908 158 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 SMPD1P17405 629 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 CYP11B2P19099 503 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 YWHABP31946 246 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 TCF7P36402 384 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 TRIM32Q13049 653 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 UGCGQ16739 394 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 CCDC144BQ3MJ40 725 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 DUSP28Q4G0W2 176 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 TMEM63BQ5T3F8 832 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 UTP14CQ5TAP6 766 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 RINT1Q6NUQ1 792 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 UNC13DQ70J99 1090 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 TRMT1LQ7Z2T5 733 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 CCDC65Q8IXS2 484 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 MLKLQ8NB16 471 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 TTYH1Q9H313 450 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 EXOC1Q9NV70 894 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 PANK4Q9NVE7 773 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 FAM184BQ9ULE4 1060 aa14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 MAFBQ9Y5Q3 323 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-209ENST00000595803 IGKV6D-21A0A0A0MT36 114 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 ZNF865P0CJ78 1059 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 ZNF165P49910 485 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 ARHGAP1Q07960 439 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 PSMD2Q13200 908 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 HSDL1Q3SXM5 330 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 ARSHQ5FYA8 562 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 XKR9Q5GH70 373 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 ZNF658Q5TYW1 1059 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 CCDC60Q8IWA6 550 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 USP38Q8NB14 1042 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 RNF214Q8ND24 703 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 OR6J1Q8NGC5 347 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 GLG1Q92896 1179 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 ZHX3Q9H4I2 956 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 KCND2Q9NZV8 630 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 NRBP1Q9UHY1 535 aa14.5□□□□□ -0.09
SHKBP1-209ENST00000595803 LRRC37A2A6NM11 1700 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 DOCK5Q9H7D0 1870 aa14.49□□□□□ -0.09
SHKBP1-209ENST00000595803 NPHP3-ACAD11A0A0J9YXS1 232 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms