RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 KCNV1Q6PIU1 500 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 CCDC65Q8IXS2 484 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 DDX47Q9H0S4 455 aaKnown RBP16.76■□□□□ 0.27
ZNF541-205ENST00000595558 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
ZNF541-205ENST00000595558 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
ZNF541-205ENST00000595558 KIF4AO95239 1232 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 KRT18P05783 430 aaKnown RBP16.75■□□□□ 0.27
ZNF541-205ENST00000595558 MYBP10242 640 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 MARSP56192 900 aaKnown RBP16.75■□□□□ 0.27
ZNF541-205ENST00000595558 GPATCH4Q5T3I0 446 aaKnown RBP16.75■□□□□ 0.27
ZNF541-205ENST00000595558 STRIP1Q5VSL9 837 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 CCDC174Q6PII3 467 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 MREGQ8N565 214 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 ATP6V1G3Q96LB4 118 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 RGL1Q9NZL6 768 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 RSPH10B2B2RC85 870 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 MYO1FO00160 1098 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 PPIP5K2O43314 1243 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 RSPH10BP0C881 870 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 UCHL3P15374 230 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 HDLBPQ00341 1268 aaKnown RBP16.75■□□□□ 0.27
ZNF541-205ENST00000595558 KCNA1Q09470 495 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 IPO4Q8TEX9 1081 aaKnown RBP16.75■□□□□ 0.27
ZNF541-205ENST00000595558 ZNF277Q9NRM2 450 aaPredicted RBP16.75■□□□□ 0.27
ZNF541-205ENST00000595558 CENPFP49454 3210 aa16.75■□□□□ 0.27
ZNF541-205ENST00000595558 MYH4Q9Y623 1939 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 ARFGEF1Q9Y6D6 1849 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 HSD17B3P37058 310 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 CASP4P49662 377 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 SLC12A3P55017 1021 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 ITGB3BPQ13352 177 aaPredicted RBP16.74■□□□□ 0.27
ZNF541-205ENST00000595558 DCAF17Q5H9S7 520 aaPredicted RBP16.74■□□□□ 0.27
ZNF541-205ENST00000595558 HYIQ5T013 277 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 LRRC57Q8N9N7 239 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
ZNF541-205ENST00000595558 NAGPAQ9UK23 515 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 BACH1O14867 736 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 CHMP2AO43633 222 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 PON1P27169 355 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 ARHGAP4P98171 946 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 FOXR2Q6PJQ5 311 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 CATSPER3Q86XQ3 398 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 KSR1Q8IVT5 923 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 METTL13Q8N6R0 699 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 TAF4BQ92750 862 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 EPN3Q9H201 632 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 LUC7LQ9NQ29 371 aaKnown RBP16.74■□□□□ 0.27
ZNF541-205ENST00000595558 CAPN7Q9Y6W3 813 aa16.74■□□□□ 0.27
ZNF541-205ENST00000595558 CETN3O15182 167 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 PPP1R37O75864 691 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 AKAP3O75969 853 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 GNA14O95837 355 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 HNRNPH1P31943 449 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 HSPA9P38646 679 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 PTGISQ16647 500 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 CD302Q8IX05 232 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 PIGOQ8TEQ8 1089 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 WHAMMQ8TF30 809 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 ZNF473Q8WTR7 871 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 SCFD2Q8WU76 684 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 VEZTQ9HBM0 779 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 PPANQ9NQ55 473 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 TULP1O00294 542 aaPredicted RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 SART1O43290 800 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 MDH1P40925 334 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 USP11P51784 963 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 TNNC1P63316 161 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 ALKBH5Q6P6C2 394 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 MMS22LQ6ZRQ5 1243 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 SFR1Q86XK3 245 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 CCT8L2Q96SF2 557 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 ISCUQ9H1K1 167 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 DHX36Q9H2U1 1008 aaKnown RBP16.73■□□□□ 0.27
ZNF541-205ENST00000595558 AMACRQ9UHK6 382 aa16.73■□□□□ 0.27
ZNF541-205ENST00000595558 TMCO5BA8MYB1 307 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 DCDC2CA8MYV0 355 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 H0YGN5 161 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 EML1O00423 815 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 GIT2Q14161 759 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 TCERG1LQ5VWI1 586 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
ZNF541-205ENST00000595558 REEP2Q9BRK0 252 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 CELF4Q9BZC1 486 aaKnown RBP16.72■□□□□ 0.27
ZNF541-205ENST00000595558 TMEM39BQ9GZU3 492 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 TMBIM4Q9HC24 238 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 PKD2L1Q9P0L9 805 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 NOC2LQ9Y3T9 749 aaKnown RBP16.72■□□□□ 0.27
ZNF541-205ENST00000595558 NFS1Q9Y697 457 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 LRRC37AA6NMS7 1700 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 PLSCR1O15162 318 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 CLIC2O15247 247 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 CFBP00751 764 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 TMOD1P28289 359 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms