RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 UPP2O95045 317 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 ATP4AP20648 1035 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 NR5A1Q13285 461 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 LPIN1Q14693 890 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 TCTN1Q2MV58 587 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 FAM43BQ6ZT52 329 aaPredicted RBP19.53■□□□□ 0.72
IRF3-208ENST00000594387 DIS3L2Q8IYB7 885 aaKnown RBP19.53■□□□□ 0.72
IRF3-208ENST00000594387 ETNPPLQ8TBG4 499 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 GJA10Q969M2 543 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 ZBTB10Q96DT7 871 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 MAP7D2Q96T17 732 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 FTHL17Q9BXU8 183 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 KIF3AQ9Y496 699 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 NLRC5Q86WI3 1866 aa19.53■□□□□ 0.72
IRF3-208ENST00000594387 BTBD18B2RXH4 712 aa19.52■□□□□ 0.72
IRF3-208ENST00000594387 GTPBP6O43824 516 aaPredicted RBP19.52■□□□□ 0.72
IRF3-208ENST00000594387 SLC37A4O43826 429 aa19.52■□□□□ 0.72
IRF3-208ENST00000594387 PRKCEQ02156 737 aa19.52■□□□□ 0.72
IRF3-208ENST00000594387 PAK2Q13177 524 aa19.52■□□□□ 0.72
IRF3-208ENST00000594387 TMCO2Q7Z6W1 182 aaPredicted RBP19.52■□□□□ 0.72
IRF3-208ENST00000594387 ZNF710Q8N1W2 664 aa19.52■□□□□ 0.72
IRF3-208ENST00000594387 YME1L1Q96TA2 773 aa19.52■□□□□ 0.72
IRF3-208ENST00000594387 CERS4Q9HA82 394 aa19.52■□□□□ 0.72
IRF3-208ENST00000594387 KDM3AQ9Y4C1 1321 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 DNM2P50570 870 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 PSMC5P62195 406 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 TAP1Q03518 808 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 TBC1D8BQ0IIM8 1120 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 XKR3Q5GH77 459 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 EFCAB12Q6NXP0 572 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 ARNTL2Q8WYA1 636 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 TOP1MTQ969P6 601 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 KIF2CQ99661 725 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 SUGCTQ9HAC7 445 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 RNF216Q9NWF9 866 aaPredicted RBP19.51■□□□□ 0.71
IRF3-208ENST00000594387 SEPT9Q9UHD8 586 aaPredicted RBP19.51■□□□□ 0.71
IRF3-208ENST00000594387 AKT3Q9Y243 479 aa19.51■□□□□ 0.71
IRF3-208ENST00000594387 DDX11L8A8MPP1 907 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 C22orf31O95567 290 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 CD52P31358 61 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 NFX1Q12986 1120 aaKnown RBP19.5■□□□□ 0.71
IRF3-208ENST00000594387 PPP2R5CQ13362 524 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 KIAA0319LQ8IZA0 1049 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 KCNMB3Q9NPA1 279 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 TTC3P53804 2025 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 SZT2Q5T011 3432 aa19.5■□□□□ 0.71
IRF3-208ENST00000594387 LAMA3Q16787 3333 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 ZBTB42B2RXF5 422 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 GPR182O15218 404 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 RPS6KA5O75582 802 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 P4HBP07237 508 aaKnown RBP19.49■□□□□ 0.71
IRF3-208ENST00000594387 QARSP47897 775 aaKnown RBP19.49■□□□□ 0.71
IRF3-208ENST00000594387 MCM2P49736 904 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 GUCY1B3Q02153 619 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 CALCRLQ16602 461 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 EXOC8Q8IYI6 725 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 BANK1Q8NDB2 785 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 PPM1EQ8WY54 764 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 SCLT1Q96NL6 688 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 TGS1Q96RS0 853 aaKnown RBP19.49■□□□□ 0.71
IRF3-208ENST00000594387 JPH2Q9BR39 696 aaPredicted RBP19.49■□□□□ 0.71
IRF3-208ENST00000594387 OSBPL7Q9BZF2 842 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 TSPYL2Q9H2G4 693 aaPredicted RBP19.49■□□□□ 0.71
IRF3-208ENST00000594387 PADI3Q9ULW8 664 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 PCDHA12Q9UN75 941 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 RALGAPA2Q2PPJ7 1873 aa19.49■□□□□ 0.71
IRF3-208ENST00000594387 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.48■□□□□ 0.71
IRF3-208ENST00000594387 ENPP3O14638 875 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 ZNF862O60290 1169 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 STAG3L1P0CL83 205 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 ATP2B1P20020 1258 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 CRYBB1P53674 252 aaPredicted RBP19.48■□□□□ 0.71
IRF3-208ENST00000594387 CDC42EP1Q00587 391 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 EPHA7Q15375 998 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 UGCGQ16739 394 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 MTERF2Q49AM1 385 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 EARS2Q5JPH6 523 aaKnown RBP19.48■□□□□ 0.71
IRF3-208ENST00000594387 NCAPH2Q6IBW4 605 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 TNFRSF25Q93038 417 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 NIFKQ9BYG3 293 aaKnown RBP19.48■□□□□ 0.71
IRF3-208ENST00000594387 LRFN2Q9ULH4 789 aa19.48■□□□□ 0.71
IRF3-208ENST00000594387 FAM205CA6NFA0 338 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 NEMFO60524 1076 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 CLCN3P51790 818 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 HTRA4P83105 476 aaPredicted RBP19.47■□□□□ 0.71
IRF3-208ENST00000594387 ST3GAL1Q11201 340 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 B3GNT9Q6UX72 402 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 OTUD6AQ7L8S5 288 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 HAS1Q92839 578 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 SAMD11Q96NU1 681 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 PPP1R16BQ96T49 567 aa19.47■□□□□ 0.71
IRF3-208ENST00000594387 FOXP1Q9H334 677 aaPredicted RBP19.47■□□□□ 0.71
IRF3-208ENST00000594387 AGO3Q9H9G7 860 aaKnown RBP19.47■□□□□ 0.71
IRF3-208ENST00000594387 NOL7Q9UMY1 257 aaKnown RBP19.47■□□□□ 0.71
IRF3-208ENST00000594387 DENND3A2RUS2 1198 aa19.46■□□□□ 0.71
IRF3-208ENST00000594387 LCHNA4D1U4 455 aa19.46■□□□□ 0.71
IRF3-208ENST00000594387 LINC01553A4QN01 128 aa19.46■□□□□ 0.71
IRF3-208ENST00000594387 VTNP04004 478 aa19.46■□□□□ 0.71
IRF3-208ENST00000594387 NLRP11P59045 1033 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms