RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NR1D1P20393 614 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 DCAF8Q5TAQ9 597 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 HHIPL2Q6UWX4 724 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 SPATS2Q86XZ4 545 aaKnown RBP18.01■□□□□ 0.47
LIG1-206ENST00000594067 CYP2W1Q8TAV3 490 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 AP1M1Q9BXS5 423 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 IKZF4Q9H2S9 585 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 PCDHB13Q9Y5F0 798 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 BZW2Q9Y6E2 419 aaKnown RBP18.01■□□□□ 0.47
LIG1-206ENST00000594067 ASTN1O14525 1302 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 LTBP4Q8N2S1 1624 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 FSBPO95073 299 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 CRKP46108 304 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 ERVK-9P63128 1117 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 HLTFQ14527 1009 aaKnown RBP eCLIP18.01■□□□□ 0.47
LIG1-206ENST00000594067 Q4G0T1 1027 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 SLC30A10Q6XR72 485 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 SIAH1Q8IUQ4 282 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 LRRC57Q8N9N7 239 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 C1orf131Q8NDD1 294 aaKnown RBP18.01■□□□□ 0.47
LIG1-206ENST00000594067 WHAMMQ8TF30 809 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 MKL1Q969V6 931 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 SIX2Q9NPC8 291 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 KCNQ5Q9NR82 932 aa18.01■□□□□ 0.47
LIG1-206ENST00000594067 SPDYE3A6NKU9 549 aa18■□□□□ 0.47
LIG1-206ENST00000594067 TMCO5BA8MYB1 307 aa18■□□□□ 0.47
LIG1-206ENST00000594067 MSH4O15457 936 aa18■□□□□ 0.47
LIG1-206ENST00000594067 PPP1R37O75864 691 aa18■□□□□ 0.47
LIG1-206ENST00000594067 HOXA13P31271 388 aaPredicted RBP18■□□□□ 0.47
LIG1-206ENST00000594067 MNAT1P51948 309 aa18■□□□□ 0.47
LIG1-206ENST00000594067 ATP6V1G3Q96LB4 118 aa18■□□□□ 0.47
LIG1-206ENST00000594067 TYW1Q9NV66 732 aaKnown RBP18■□□□□ 0.47
LIG1-206ENST00000594067 RGL1Q9NZL6 768 aa18■□□□□ 0.47
LIG1-206ENST00000594067 NYAP2Q9P242 653 aa18■□□□□ 0.47
LIG1-206ENST00000594067 KLRG2A4D1S0 409 aaPredicted RBP18■□□□□ 0.47
LIG1-206ENST00000594067 MYO1FO00160 1098 aa18■□□□□ 0.47
LIG1-206ENST00000594067 KIAA0754O94854 1291 aa18■□□□□ 0.47
LIG1-206ENST00000594067 PTGISQ16647 500 aa18■□□□□ 0.47
LIG1-206ENST00000594067 MAATS1Q7Z4T9 603 aa18■□□□□ 0.47
LIG1-206ENST00000594067 FBXO11Q86XK2 927 aa18■□□□□ 0.47
LIG1-206ENST00000594067 DDX42Q86XP3 938 aaKnown RBP eCLIP18■□□□□ 0.47
LIG1-206ENST00000594067 TPCN2Q8NHX9 752 aa18■□□□□ 0.47
LIG1-206ENST00000594067 ZNF473Q8WTR7 871 aaKnown RBP18■□□□□ 0.47
LIG1-206ENST00000594067 SLC35C1Q96A29 364 aa18■□□□□ 0.47
LIG1-206ENST00000594067 PBKQ96KB5 322 aa18■□□□□ 0.47
LIG1-206ENST00000594067 GCNT4Q9P109 453 aa18■□□□□ 0.47
LIG1-206ENST00000594067 F5H6K3 240 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 TBX3O15119 743 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 TBCAO75347 108 aaKnown RBP17.99■□□□□ 0.47
LIG1-206ENST00000594067 FLOT1O75955 427 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 GDF11O95390 407 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 POLD1P28340 1107 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 MDH1P40925 334 aaKnown RBP17.99■□□□□ 0.47
LIG1-206ENST00000594067 SEC24CP53992 1094 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 ICA1Q05084 483 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 KLRC3Q07444 240 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 IFI16Q16666 785 aaKnown RBP17.99■□□□□ 0.47
LIG1-206ENST00000594067 YTHDF3Q7Z739 585 aaKnown RBP17.99■□□□□ 0.47
LIG1-206ENST00000594067 METTL13Q8N6R0 699 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 SCFD2Q8WU76 684 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 TAF1DQ9H5J8 278 aaPredicted RBP17.99■□□□□ 0.47
LIG1-206ENST00000594067 PLAAQ9Y263 795 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 FAM170AA1A519 330 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 EML1O00423 815 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 TOM1O60784 492 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 PRKCIP41743 596 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 ITGB3BPQ13352 177 aaPredicted RBP17.99■□□□□ 0.47
LIG1-206ENST00000594067 KIAA0825Q8IV33 1275 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 CCT8L2Q96SF2 557 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 ISCUQ9H1K1 167 aa17.99■□□□□ 0.47
LIG1-206ENST00000594067 CES2O00748 559 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 GFPT2O94808 682 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 SREBF1P36956 1147 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 USP8P40818 1118 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIG1-206ENST00000594067 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 PIGOQ8TEQ8 1089 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 U2AF1L4Q8WU68 220 aaKnown RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 EIF2AK1Q9BQI3 630 aaKnown RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 DDX47Q9H0S4 455 aaKnown RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 DBNDD1Q9H9R9 158 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 METTL14Q9HCE5 456 aaKnown RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 VAV3Q9UKW4 847 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 NOC2LQ9Y3T9 749 aaKnown RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 LTBP1Q14766 1721 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 GREB1LQ9C091 1923 aaPredicted RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 DDX3XO00571 662 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIG1-206ENST00000594067 H2AFZP0C0S5 128 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 RPL13P26373 211 aaKnown RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 ECHS1P30084 290 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 ZNF76P36508 570 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 HSPA9P38646 679 aaKnown RBP17.98■□□□□ 0.47
LIG1-206ENST00000594067 JAM2P57087 298 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 H2AFVQ71UI9 128 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 SH3BP5LQ7L8J4 393 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 PEX26Q7Z412 305 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 MYCBPAPQ8TBZ2 947 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 ACTRT1Q8TDG2 376 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 FAM20AQ96MK3 541 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms