RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CKBP12277 381 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 XKR3Q5GH77 459 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 KAT6AQ92794 2004 aa21.96■■□□□ 1.11
LSM4-203ENST00000593829 TRIP12Q14669 1992 aaPredicted RBP21.95■■□□□ 1.1
LSM4-203ENST00000593829 POTEMA6NI47 508 aa21.95■■□□□ 1.1
LSM4-203ENST00000593829 CSF2RAP15509 400 aa21.95■■□□□ 1.1
LSM4-203ENST00000593829 SELPP16109 830 aa21.95■■□□□ 1.1
LSM4-203ENST00000593829 THPOP40225 353 aa21.95■■□□□ 1.1
LSM4-203ENST00000593829 PRPHP41219 470 aa21.95■■□□□ 1.1
LSM4-203ENST00000593829 PPIGQ13427 754 aaKnown RBP eCLIP21.95■■□□□ 1.1
LSM4-203ENST00000593829 DYDC2Q96IM9 177 aa21.95■■□□□ 1.1
LSM4-203ENST00000593829 EIF2AK1Q9BQI3 630 aaKnown RBP21.95■■□□□ 1.1
LSM4-203ENST00000593829 RGL1Q9NZL6 768 aa21.95■■□□□ 1.1
LSM4-203ENST00000593829 ZBTB42B2RXF5 422 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 IQCF3P0C7M6 154 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 FXR2P51116 673 aaKnown RBP eCLIP21.94■■□□□ 1.16e-8■□□□□ 9.9
LSM4-203ENST00000593829 ATP2C1P98194 919 aaPredicted RBP21.94■■□□□ 1.1
LSM4-203ENST00000593829 MTHFD1LQ6UB35 978 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 RUFY4Q6ZNE9 571 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 NEK9Q8TD19 979 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 SYAP1Q96A49 352 aaPredicted RBP21.94■■□□□ 1.1
LSM4-203ENST00000593829 SCLYQ96I15 445 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 LXNQ9BS40 222 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 PRO3102Q9H379 93 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 ZSWIM4Q9H7M6 989 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 PCDHA2Q9Y5H9 948 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 WDR81Q562E7 1941 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 CAND2O75155 1236 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 KLRC1P26715 233 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 CYP4A11Q02928 519 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 HSD17B14Q9BPX1 270 aa21.94■■□□□ 1.1
LSM4-203ENST00000593829 NIFKQ9BYG3 293 aaKnown RBP21.94■■□□□ 1.1
LSM4-203ENST00000593829 SEPT9Q9UHD8 586 aaPredicted RBP21.94■■□□□ 1.1
LSM4-203ENST00000593829 COLQQ9Y215 455 aaPredicted RBP21.94■■□□□ 1.1
LSM4-203ENST00000593829 SLITRK3O94933 977 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 STBD1O95210 358 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 BMP15O95972 392 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 CTTNQ14247 550 aaKnown RBP21.93■■□□□ 1.1
LSM4-203ENST00000593829 ZNF618Q5T7W0 954 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 DTHD1Q6ZMT9 781 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 LRRC8DQ7L1W4 858 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 RSPH3Q86UC2 560 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 TPH2Q8IWU9 490 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 C4orf19Q8IY42 314 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 ERMNQ8TAM6 284 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 ZBTB10Q96DT7 871 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 RAB34Q9BZG1 259 aa21.93■■□□□ 1.1
LSM4-203ENST00000593829 RPLP2P05387 115 aaKnown RBP21.92■■□□□ 1.1
LSM4-203ENST00000593829 RFC2P35250 354 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 PDIA5Q14554 519 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 RPAINQ86UA6 219 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 WRAP73Q9P2S5 460 aaPredicted RBP21.92■■□□□ 1.1
LSM4-203ENST00000593829 SYCE3A1L190 88 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 PARNO95453 639 aaKnown RBP21.92■■□□□ 1.1
LSM4-203ENST00000593829 FAM173BQ6P4H8 233 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 RPUSD2Q8IZ73 545 aaKnown RBP21.92■■□□□ 1.1
LSM4-203ENST00000593829 DNAJB3Q8WWF6 145 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 IL23AQ9NPF7 189 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 LRWD1Q9UFC0 647 aa21.92■■□□□ 1.1
LSM4-203ENST00000593829 SMIM35A0A1B0GVV1 85 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 RSPH10B2B2RC85 870 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 MAGEB2O15479 319 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 C22orf31O95567 290 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 RSPH10BP0C881 870 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 ZSCAN22P10073 491 aaPredicted RBP21.91■■□□□ 1.1
LSM4-203ENST00000593829 EPHB4P54760 987 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 SF3A1Q15459 793 aaKnown RBP21.91■■□□□ 1.1
LSM4-203ENST00000593829 ARL6IP4Q66PJ3 421 aaKnown RBP21.91■■□□□ 1.1
LSM4-203ENST00000593829 ANO5Q75V66 913 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 IGSF22Q8N9C0 903 aa21.91■■□□□ 1.1
LSM4-203ENST00000593829 FAM49AQ9H0Q0 323 aaPredicted RBP21.91■■□□□ 1.1
LSM4-203ENST00000593829 TMEM150BA6NC51 233 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 LYPLA2O95372 231 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 TARBP2Q15633 366 aaKnown RBP21.9■■□□□ 1.1
LSM4-203ENST00000593829 IL17AQ16552 155 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 MTERF2Q49AM1 385 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 TRAF7Q6Q0C0 670 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 MTERF4Q7Z6M4 381 aaKnown RBP21.9■■□□□ 1.1
LSM4-203ENST00000593829 POLR3CQ9BUI4 534 aaPredicted RBP21.9■■□□□ 1.1
LSM4-203ENST00000593829 TUFT1Q9NNX1 390 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 YWHABP31946 246 aaKnown RBP21.9■■□□□ 1.1
LSM4-203ENST00000593829 TBC1D8BQ0IIM8 1120 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 OTUD6AQ7L8S5 288 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 TSPY26PQ9H489 355 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 STK24Q9Y6E0 443 aa21.9■■□□□ 1.1
LSM4-203ENST00000593829 CTSHP09668 335 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 ACRP10323 421 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 UVSSAQ2YD98 709 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 FOXD4L5Q5VV16 416 aaPredicted RBP21.89■■□□□ 1.09
LSM4-203ENST00000593829 HAUS3Q68CZ6 603 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 C16orf59Q7L2K0 433 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 DEFB128Q7Z7B8 93 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 CATSPER3Q86XQ3 398 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 NME8Q8N427 588 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 METTL13Q8N6R0 699 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 TMEM87AQ8NBN3 555 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 FOXD4L4Q8WXT5 416 aaPredicted RBP21.89■■□□□ 1.09
LSM4-203ENST00000593829 CLIC4Q9Y696 253 aa21.89■■□□□ 1.09
LSM4-203ENST00000593829 TANC1Q9C0D5 1861 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 A0A1W2PPC1 479 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms