RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 POF1BQ8WVV4 589 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 GLT8D2Q9H1C3 349 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 RNF216Q9NWF9 866 aaPredicted RBP16.76■□□□□ 0.27
PNKP-202ENST00000593706 TMEM260Q9NX78 707 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 TCEAL9Q9UHQ7 104 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 MUTYHQ9UIF7 546 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 PCDHB7Q9Y5E2 793 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 V9GY48 417 aaPredicted RBP16.76■□□□□ 0.27
PNKP-202ENST00000593706 COL1A2P08123 1366 aa16.76■□□□□ 0.27
PNKP-202ENST00000593706 ZDBF2Q9HCK1 2354 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 MEIS1O00470 390 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 HBP1O60381 514 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 KLRC1P26715 233 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 NRIP1P48552 1158 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
PNKP-202ENST00000593706 ADAM15Q13444 863 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 ODR4Q5SWX8 454 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 PDXDC2PQ6P474 469 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 DHX32Q7L7V1 743 aaKnown RBP16.75■□□□□ 0.27
PNKP-202ENST00000593706 ADGRD2Q7Z7M1 963 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 CCDC60Q8IWA6 550 aaPredicted RBP16.75■□□□□ 0.27
PNKP-202ENST00000593706 CRIPAKQ8N1N5 446 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 SPPL3Q8TCT6 385 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 ATP8B4Q8TF62 1192 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 TMX1Q9H3N1 280 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 ZNF302Q9NR11 478 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 PCDHB12Q9Y5F1 795 aa16.75■□□□□ 0.27
PNKP-202ENST00000593706 USP34Q70CQ2 3546 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 KLF18A0A0U1RQI7 1052 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 PPFIA3O75145 1194 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 ATG7O95352 703 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 CCNE2O96020 404 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 FGD1P98174 961 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 KRT32Q14532 448 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 MIS18BP1Q6P0N0 1132 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 NIPA1Q7RTP0 329 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 RBM23Q86U06 439 aaKnown RBP16.74■□□□□ 0.27
PNKP-202ENST00000593706 PLA2G4DQ86XP0 818 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 RNF135Q8IUD6 432 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 CKAP2LQ8IYA6 745 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 EFHBQ8N7U6 833 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 PPP1R16BQ96T49 567 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 AAASQ9NRG9 546 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
PNKP-202ENST00000593706 IGKV6D-21A0A0A0MT36 114 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 TBKBP1A7MCY6 615 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 IPO5O00410 1097 aaKnown RBP16.73■□□□□ 0.27
PNKP-202ENST00000593706 FUT2Q10981 343 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
PNKP-202ENST00000593706 ZNF484Q5JVG2 852 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 JAKMIP3Q5VZ66 844 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 ABHD15Q6UXT9 468 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 HFE2Q6ZVN8 426 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 ALYREFQ86V81 257 aaKnown RBP16.73■□□□□ 0.27
PNKP-202ENST00000593706 SMRP1Q8NCR6 262 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 MICAL1Q8TDZ2 1067 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 MSLNLQ96KJ4 702 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 ADAM2Q99965 735 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 ERVK-5Q9HDB9 667 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 C1orf112Q9NSG2 853 aa16.73■□□□□ 0.27
PNKP-202ENST00000593706 BARX2Q9UMQ3 279 aaPredicted RBP16.73■□□□□ 0.27
PNKP-202ENST00000593706 NOC2LQ9Y3T9 749 aaKnown RBP16.73■□□□□ 0.27
PNKP-202ENST00000593706 FAM86B1E9PN63 330 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 MGEA5O60502 916 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 EYA4O95677 639 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 FAM86B2P0C5J1 330 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
PNKP-202ENST00000593706 SETQ01105 290 aaPredicted RBP16.72■□□□□ 0.27
PNKP-202ENST00000593706 KIZQ2M2Z5 673 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 SWSAP1Q6NVH7 229 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 TRMT1LQ7Z2T5 733 aaKnown RBP16.72■□□□□ 0.27
PNKP-202ENST00000593706 THNSL1Q8IYQ7 743 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 METTL13Q8N6R0 699 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 TMEM40Q8WWA1 233 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 ZNF577Q9BSK1 485 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 TLE6Q9H808 572 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 TLR9Q9NR96 1032 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
PNKP-202ENST00000593706 GPR182O15218 404 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
PNKP-202ENST00000593706 REC8O95072 547 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 GLP2RO95838 553 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
PNKP-202ENST00000593706 CPA1P15085 419 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
PNKP-202ENST00000593706 RCAN1P53805 252 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 UBE3AQ05086 875 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 COASYQ13057 564 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 FAM43BQ6ZT52 329 aaPredicted RBP16.71■□□□□ 0.27
PNKP-202ENST00000593706 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 KIAA0319LQ8IZA0 1049 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 REXO1Q8N1G1 1221 aaKnown RBP16.71■□□□□ 0.27
PNKP-202ENST00000593706 FBXL16Q8N461 479 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 MFSD14AQ96MC6 490 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 OSMRQ99650 979 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 KCNH6Q9H252 994 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms