RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 FAM86B2P0C5J1 330 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 SETQ01105 290 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-203ENST00000593641 CLUL1Q15846 466 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 CSPP1Q1MSJ5 1256 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 ZNF484Q5JVG2 852 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 ODR4Q5SWX8 454 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 SKAP1Q86WV1 359 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 CKAP2LQ8IYA6 745 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 TMX1Q9H3N1 280 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 RNF216Q9NWF9 866 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-203ENST00000593641 TCEAL9Q9UHQ7 104 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 WDR81Q562E7 1941 aa25.74■■□□□ 1.71
SSBP4-203ENST00000593641 PLXNA4Q9HCM2 1894 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 RPS6KA5O75582 802 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 CYP3A4P08684 503 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 ADD1P35611 737 aaKnown RBP25.73■■□□□ 1.71
SSBP4-203ENST00000593641 SARSP49591 514 aaKnown RBP25.73■■□□□ 1.71
SSBP4-203ENST00000593641 DLX2Q07687 328 aaPredicted RBP25.73■■□□□ 1.71
SSBP4-203ENST00000593641 MCTP2Q6DN12 878 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 KLHL23Q8NBE8 558 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 POP1Q99575 1024 aaKnown RBP25.73■■□□□ 1.71
SSBP4-203ENST00000593641 ZNF577Q9BSK1 485 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 C6orf50Q9HD87 102 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 PCDHB7Q9Y5E2 793 aa25.73■■□□□ 1.71
SSBP4-203ENST00000593641 ESYT2A0FGR8 921 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 DENND3A2RUS2 1198 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 TBX10O75333 385 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 ITGB1P05556 798 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 GTF2F1P35269 517 aaKnown RBP eCLIP25.72■■□□□ 1.71
SSBP4-203ENST00000593641 NDUFV1P49821 464 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 SMAD2Q15796 467 aaKnown RBP25.72■■□□□ 1.71
SSBP4-203ENST00000593641 SWSAP1Q6NVH7 229 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 REXO1Q8N1G1 1221 aaKnown RBP25.72■■□□□ 1.71
SSBP4-203ENST00000593641 ERVK-5Q9HDB9 667 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 TBC1D22BQ9NU19 505 aa25.72■■□□□ 1.71
SSBP4-203ENST00000593641 IGLV3-22A0A075B6J6 115 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 DHX15O43143 795 aaKnown RBP25.71■■□□□ 1.71
SSBP4-203ENST00000593641 MBTPS2O43462 519 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 SMAD4Q13485 552 aaKnown RBP25.71■■□□□ 1.71
SSBP4-203ENST00000593641 CAMK1Q14012 370 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 SPOUT1Q5T280 376 aaKnown RBP25.71■■□□□ 1.71
SSBP4-203ENST00000593641 KIAA0319LQ8IZA0 1049 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 SPPL3Q8TCT6 385 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 UIMC1Q96RL1 719 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 UPF3BQ9BZI7 483 aaKnown RBP25.71■■□□□ 1.71
SSBP4-203ENST00000593641 ZMYND12Q9H0C1 365 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 C1orf112Q9NSG2 853 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 CD207Q9UJ71 328 aa25.71■■□□□ 1.71
SSBP4-203ENST00000593641 C19orf67A6NJJ6 358 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 GPR182O15218 404 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 DNAJB1P25685 340 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 GNA11P29992 359 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 GATMP50440 423 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 APOBRQ0VD83 1088 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 ZNF746Q6NUN9 644 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-203ENST00000593641 Q6ZUG5 572 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 SMAP1Q8IYB5 467 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-203ENST00000593641 POF1BQ8WVV4 589 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 CRYGNQ8WXF5 182 aa25.7■■□□□ 1.7
SSBP4-203ENST00000593641 BBXQ8WY36 941 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-203ENST00000593641 NOC2LQ9Y3T9 749 aaKnown RBP25.7■■□□□ 1.7
SSBP4-203ENST00000593641 LINC01565O15544 149 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 CPA1P15085 419 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 AKAP17AQ02040 695 aaKnown RBP25.69■■□□□ 1.7
SSBP4-203ENST00000593641 TMEM40Q8WWA1 233 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 BRF1Q92994 677 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 ADAM2Q99965 735 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 AAASQ9NRG9 546 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 ST3GAL5Q9UNP4 418 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 CEP131Q9UPN4 1083 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 PCDHB12Q9Y5F1 795 aa25.69■■□□□ 1.7
SSBP4-203ENST00000593641 PIEZO1Q92508 2521 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 MGEA5O60502 916 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 PSAPP07602 524 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 CRYBB1P53674 252 aaPredicted RBP25.68■■□□□ 1.7
SSBP4-203ENST00000593641 ADAM15Q13444 863 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 BLOC1S2Q6QNY1 142 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 SLC24A5Q71RS6 500 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 TRMT1LQ7Z2T5 733 aaKnown RBP25.68■■□□□ 1.7
SSBP4-203ENST00000593641 METTL13Q8N6R0 699 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 JAKMIP1Q96N16 626 aaKnown RBP25.68■■□□□ 1.7
SSBP4-203ENST00000593641 PPP1R16BQ96T49 567 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 OSMRQ99650 979 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 CDHR5Q9HBB8 845 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 RGS18Q9NS28 235 aa25.68■■□□□ 1.7
SSBP4-203ENST00000593641 MAFBQ9Y5Q3 323 aaPredicted RBP25.68■■□□□ 1.7
SSBP4-203ENST00000593641 TBKBP1A7MCY6 615 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 ZBTB42B2RXF5 422 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 C22orf31O95567 290 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 ATP4AP20648 1035 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 HOXD11P31277 338 aaPredicted RBP25.67■■□□□ 1.7
SSBP4-203ENST00000593641 IRS1P35568 1242 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 KIZQ2M2Z5 673 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 PRR16Q569H4 304 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 ADGRD2Q7Z7M1 963 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 BICD2Q8TD16 824 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 SAMM50Q9Y512 469 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 PCDHA10Q9Y5I2 948 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 NID2Q14112 1375 aa25.67■■□□□ 1.7
SSBP4-203ENST00000593641 PRPF3O43395 683 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms