RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 LRFN3Q9BTN0 628 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 TMX1Q9H3N1 280 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 ALG13Q9NP73 1137 aaKnown RBP23.24■■□□□ 1.31
TRIM47-207ENST00000593089 MYH9P35579 1960 aaKnown RBP23.23■■□□□ 1.31
TRIM47-207ENST00000593089 ATP4AP20648 1035 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 GNA11P29992 359 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 GATMP50440 423 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 COL19A1Q14993 1142 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 PRR16Q569H4 304 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 ZNF484Q5JVG2 852 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 KIAA0319LQ8IZA0 1049 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 PPP1R16BQ96T49 567 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 PLVAPQ9BX97 442 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 CDHR5Q9HBB8 845 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 TBC1D22BQ9NU19 505 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 TCEAL9Q9UHQ7 104 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 LRFN2Q9ULH4 789 aa23.23■■□□□ 1.31
TRIM47-207ENST00000593089 RPS6KA5O75582 802 aa23.22■■□□□ 1.31
TRIM47-207ENST00000593089 MMP1P03956 469 aa23.22■■□□□ 1.31
TRIM47-207ENST00000593089 TMEM31Q5JXX7 168 aa23.22■■□□□ 1.31
TRIM47-207ENST00000593089 SLC26A6Q9BXS9 759 aa23.22■■□□□ 1.31
TRIM47-207ENST00000593089 NOC2LQ9Y3T9 749 aaKnown RBP23.22■■□□□ 1.31
TRIM47-207ENST00000593089 FAM86C2PA6NEL3 165 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 ZBTB42B2RXF5 422 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 HYAL1Q12794 435 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 ZNF746Q6NUN9 644 aaPredicted RBP23.21■■□□□ 1.31
TRIM47-207ENST00000593089 TMEM40Q8WWA1 233 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 BBXQ8WY36 941 aaPredicted RBP23.21■■□□□ 1.31
TRIM47-207ENST00000593089 AGXT2Q9BYV1 514 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 IGFLR1Q9H665 355 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 ERVK-5Q9HDB9 667 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 PLAGL2Q9UPG8 496 aa23.21■■□□□ 1.31
TRIM47-207ENST00000593089 MAFBQ9Y5Q3 323 aaPredicted RBP23.21■■□□□ 1.31
TRIM47-207ENST00000593089 PI4K2BG5E9Z4 385 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 NCK2O43639 380 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 MGEA5O60502 916 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 C22orf31O95567 290 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 PSAPP07602 524 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 PSMA5P28066 241 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 LTBRP36941 435 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 SARSP49591 514 aaKnown RBP23.2■■□□□ 1.3
TRIM47-207ENST00000593089 CCT2P78371 535 aaKnown RBP23.2■■□□□ 1.3
TRIM47-207ENST00000593089 NTRK3Q16288 839 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 SMAP1Q8IYB5 467 aaPredicted RBP23.2■■□□□ 1.3
TRIM47-207ENST00000593089 FBXL16Q8N461 479 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 CCDC148Q8NFR7 591 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 BICD2Q8TD16 824 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 P2RX5Q93086 422 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 CCDC136Q96JN2 1154 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 RNF26Q9BY78 433 aaPredicted RBP23.2■■□□□ 1.3
TRIM47-207ENST00000593089 VPS54Q9P1Q0 977 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 GABBR1Q9UBS5 961 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 ST3GAL5Q9UNP4 418 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 SAMM50Q9Y512 469 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 PCDHB7Q9Y5E2 793 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 PCDHA10Q9Y5I2 948 aa23.2■■□□□ 1.3
TRIM47-207ENST00000593089 ITGB1P05556 798 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 GTF2F1P35269 517 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRIM47-207ENST00000593089 CAMK1Q14012 370 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 CLUL1Q15846 466 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 KIZQ2M2Z5 673 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 METTL13Q8N6R0 699 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 KLHL23Q8NBE8 558 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 OSMRQ99650 979 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 ADAM2Q99965 735 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 NCOA5Q9HCD5 579 aaKnown RBP23.19■■□□□ 1.3
TRIM47-207ENST00000593089 C11orf16Q9NQ32 467 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 FAM50BQ9Y247 325 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 WDR81Q562E7 1941 aa23.19■■□□□ 1.3
TRIM47-207ENST00000593089 DENND3A2RUS2 1198 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 REC8O95072 547 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 VTNP04004 478 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 IFNAR1P17181 557 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 DNAJB1P25685 340 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 PDIA3P30101 505 aaKnown RBP23.18■■□□□ 1.3
TRIM47-207ENST00000593089 CIITAP33076 1130 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 DLX2Q07687 328 aaPredicted RBP23.18■■□□□ 1.3
TRIM47-207ENST00000593089 CTC1Q2NKJ3 1217 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 NAALADL2Q58DX5 795 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 ODR4Q5SWX8 454 aa23.18■■□□□ 1.3
TRIM47-207ENST00000593089 FNDC1Q4ZHG4 1894 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-207ENST00000593089 GPR182O15218 404 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 LINC01565O15544 149 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 GPR37L1O60883 481 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 CRYBB1P53674 252 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-207ENST00000593089 SPPL3Q8TCT6 385 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 LENG9Q96B70 501 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 RGS18Q9NS28 235 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 C1orf112Q9NSG2 853 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 PLXNA4Q9HCM2 1894 aa23.17■■□□□ 1.3
TRIM47-207ENST00000593089 IRS1P35568 1242 aa23.16■■□□□ 1.3
TRIM47-207ENST00000593089 SPOUT1Q5T280 376 aaKnown RBP23.16■■□□□ 1.3
TRIM47-207ENST00000593089 SLC24A5Q71RS6 500 aa23.16■■□□□ 1.3
TRIM47-207ENST00000593089 FAM228AQ86W67 206 aa23.16■■□□□ 1.3
TRIM47-207ENST00000593089 POF1BQ8WVV4 589 aa23.16■■□□□ 1.3
TRIM47-207ENST00000593089 CEP131Q9UPN4 1083 aa23.16■■□□□ 1.3
TRIM47-207ENST00000593089 TBKBP1A7MCY6 615 aa23.15■■□□□ 1.3
TRIM47-207ENST00000593089 WDR64B1ANS9 1081 aa23.15■■□□□ 1.3
TRIM47-207ENST00000593089 MSH4O15457 936 aa23.15■■□□□ 1.3
TRIM47-207ENST00000593089 TBX10O75333 385 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms