RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 COL1A2P08123 1366 aa13.32□□□□□ -0.28
H3F3B-212ENST00000592643 IGKV6-21A0A0C4DH24 114 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 SMIM35A0A1B0GVV1 85 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 VPS37CA5D8V6 355 aaPredicted RBP13.31□□□□□ -0.28
H3F3B-212ENST00000592643 RSPH10B2B2RC85 870 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 MED24O75448 989 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 P4HBP07237 508 aaKnown RBP13.31□□□□□ -0.28
H3F3B-212ENST00000592643 RSPH10BP0C881 870 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 TECP42680 631 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
H3F3B-212ENST00000592643 NPEPPSP55786 919 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 TMEM62Q0P6H9 643 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 GNL2Q13823 731 aaKnown RBP13.31□□□□□ -0.28
H3F3B-212ENST00000592643 RILPL1Q5EBL4 403 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 XKR3Q5GH77 459 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 TAF2Q6P1X5 1199 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 OTOP2Q7RTS6 562 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 CKAP2LQ8IYA6 745 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 HERVK_113Q902F9 699 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
H3F3B-212ENST00000592643 FAM49AQ9H0Q0 323 aaPredicted RBP13.31□□□□□ -0.28
H3F3B-212ENST00000592643 PP2D1A8MPX8 630 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 STX6O43752 255 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 CAND2O75155 1236 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 LYPLA2O95372 231 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
H3F3B-212ENST00000592643 RFC2P35250 354 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
H3F3B-212ENST00000592643 CLCN3P51790 818 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-212ENST00000592643 GRIN1Q05586 938 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 LPIN1Q14693 890 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 PLEKHG4Q58EX7 1191 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 CATSPER3Q86XQ3 398 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 C4orf19Q8IY42 314 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 LRRC71Q8N4P6 559 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 CCDC155Q8N6L0 562 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 IGSF22Q8N9C0 903 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 TMEM40Q8WWA1 233 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 FAM167AQ96KS9 214 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
H3F3B-212ENST00000592643 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
H3F3B-212ENST00000592643 TCEAL9Q9UHQ7 104 aa13.3□□□□□ -0.28
H3F3B-212ENST00000592643 NOL7Q9UMY1 257 aaKnown RBP13.3□□□□□ -0.28
H3F3B-212ENST00000592643 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 MARCH6O60337 910 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 GPR32O75388 356 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 FGBP02675 491 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 PDCP20941 246 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 CDC25AP30304 524 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 MRPS6P82932 125 aaKnown RBP13.29□□□□□ -0.28
H3F3B-212ENST00000592643 PTPAQ15257 358 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 MTERF2Q49AM1 385 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 FBXO47Q5MNV8 452 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
H3F3B-212ENST00000592643 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 DBF4BQ8NFT6 615 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 RNPC3Q96LT9 517 aaKnown RBP13.29□□□□□ -0.28
H3F3B-212ENST00000592643 ADAMTS10Q9H324 1103 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
H3F3B-212ENST00000592643 ZDHHC9Q9Y397 364 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 CLIC4Q9Y696 253 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 CDY2AQ9Y6F7 541 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 SIP14410 1827 aa13.29□□□□□ -0.28
H3F3B-212ENST00000592643 VTNP04004 478 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 PFKMP08237 780 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 YWHABP31946 246 aaKnown RBP13.28□□□□□ -0.28
H3F3B-212ENST00000592643 PRPHP41219 470 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 EFCAB12Q6NXP0 572 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 TMCO2Q7Z6W1 182 aaPredicted RBP13.28□□□□□ -0.28
H3F3B-212ENST00000592643 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 RPUSD2Q8IZ73 545 aaKnown RBP13.28□□□□□ -0.28
H3F3B-212ENST00000592643 PIGOQ8TEQ8 1089 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 LRRC15Q8TF66 581 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 LINC01599Q8WXQ3 324 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 ZSWIM4Q9H7M6 989 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 XPNPEP1Q9NQW7 623 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
H3F3B-212ENST00000592643 MAFO75444 373 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-212ENST00000592643 GHRP10912 638 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 RPA1P27694 616 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 PBX2P40425 430 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 DEFB103AP81534 67 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 PDIA5Q14554 519 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 SF3A1Q15459 793 aaKnown RBP13.27□□□□□ -0.29
H3F3B-212ENST00000592643 POTEGQ6S5H5 508 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.27□□□□□ -0.297e-15■■■■■ 27.3
H3F3B-212ENST00000592643 KCNK18Q7Z418 384 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 RTN4RL1Q86UN2 441 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-212ENST00000592643 ZNF668Q96K58 619 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-212ENST00000592643 PPP1R16BQ96T49 567 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 POLR3CQ9BUI4 534 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-212ENST00000592643 CELF4Q9BZC1 486 aaKnown RBP13.27□□□□□ -0.29
H3F3B-212ENST00000592643 TMX1Q9H3N1 280 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms