RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 PLA2G4AP47712 749 aa17.3■□□□□ 0.36
MBD1-227ENST00000592060 TKFCQ3LXA3 575 aa17.3■□□□□ 0.36
MBD1-227ENST00000592060 TDRD12Q587J7 1177 aaKnown RBP17.3■□□□□ 0.36
MBD1-227ENST00000592060 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
MBD1-227ENST00000592060 SLC35C1Q96A29 364 aa17.3■□□□□ 0.36
MBD1-227ENST00000592060 AGO4Q9HCK5 861 aaKnown RBP17.3■□□□□ 0.36
MBD1-227ENST00000592060 HACL1Q9UJ83 578 aa17.3■□□□□ 0.36
MBD1-227ENST00000592060 MYH10P35580 1976 aa17.3■□□□□ 0.36
MBD1-227ENST00000592060 CLIC2O15247 247 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 SRGAP2O75044 1071 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 TACC1O75410 805 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 SASH3O75995 380 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 MOCS3O95396 460 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 MRPS9P82933 396 aaKnown RBP17.29■□□□□ 0.36
MBD1-227ENST00000592060 MAPK7Q13164 816 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 ITGB3BPQ13352 177 aaPredicted RBP17.29■□□□□ 0.36
MBD1-227ENST00000592060 MTMR2Q13614 643 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 ZC2HC1CQ53FD0 456 aaPredicted RBP17.29■□□□□ 0.36
MBD1-227ENST00000592060 SAMD7Q7Z3H4 446 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 CPXCR1Q8N123 301 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 SAMD3Q8N6K7 520 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 MMS19Q96T76 1030 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 IKZF4Q9H2S9 585 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 ARFGAP3Q9NP61 516 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 MAP3K20Q9NYL2 800 aaKnown RBP17.29■□□□□ 0.36
MBD1-227ENST00000592060 DDX39AO00148 427 aaKnown RBP17.29■□□□□ 0.36
MBD1-227ENST00000592060 ACTN1P12814 892 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 SLC9A1P19634 815 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 PON1P27169 355 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 RAPGEF1Q13905 1077 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 KLHDC7AQ5VTJ3 777 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 ZNF720Q7Z2F6 126 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 MIER3Q7Z3K6 550 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 DAW1Q8N136 415 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 HNRNPLLQ8WVV9 542 aaKnown RBP17.29■□□□□ 0.36
MBD1-227ENST00000592060 STRA6Q9BX79 667 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 SALL4Q9UJQ4 1053 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 JRKLQ9Y4A0 524 aa17.29■□□□□ 0.36
MBD1-227ENST00000592060 PPP1R37O75864 691 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 FLOT1O75955 427 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 CKAP4Q07065 602 aaKnown RBP17.28■□□□□ 0.36
MBD1-227ENST00000592060 ASIC2Q16515 512 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 TBC1D10BQ4KMP7 808 aaPredicted RBP17.28■□□□□ 0.36
MBD1-227ENST00000592060 DCAF17Q5H9S7 520 aaPredicted RBP17.28■□□□□ 0.36
MBD1-227ENST00000592060 TXLNBQ8N3L3 684 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 UBE2Q2Q8WVN8 375 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 MTFR1LQ9H019 292 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
MBD1-227ENST00000592060 SIX2Q9NPC8 291 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 ARHGEF35A5YM69 484 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 FZD9O00144 591 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 RASSF7Q02833 373 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 EXOC3L4Q17RC7 722 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 LONRF2Q1L5Z9 754 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 NBPF12Q5TAG4 269 aaPredicted RBP17.28■□□□□ 0.36
MBD1-227ENST00000592060 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 FAM133AQ8N9E0 248 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 TAAR1Q96RJ0 339 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 MKNK1Q9BUB5 465 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 DMAC2Q9NW81 257 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 PKD2L1Q9P0L9 805 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 SNX12Q9UMY4 172 aa17.28■□□□□ 0.36
MBD1-227ENST00000592060 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
MBD1-227ENST00000592060 HIP1RO75146 1068 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 P4HBP07237 508 aaKnown RBP17.27■□□□□ 0.36
MBD1-227ENST00000592060 RHOXF2BP0C7M4 288 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 UCHL3P15374 230 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 USP14P54578 494 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 COG2Q14746 738 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 PGM5Q15124 567 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 SLC18A3Q16572 532 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 STXBP4Q6ZWJ1 553 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 KSR1Q8IVT5 923 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 RPGRIP1Q96KN7 1286 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 RHOXF2Q9BQY4 288 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 FUT8Q9BYC5 575 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 UBXN6Q9BZV1 441 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 HOMER2Q9NSB8 354 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.36
MBD1-227ENST00000592060 ZNF112Q9UJU3 913 aa17.27■□□□□ 0.36
MBD1-227ENST00000592060 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
MBD1-227ENST00000592060 PDE2AO00408 941 aaPredicted RBP17.26■□□□□ 0.35
MBD1-227ENST00000592060 ZNF185O15231 689 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 PSMC2P35998 433 aaKnown RBP17.26■□□□□ 0.35
MBD1-227ENST00000592060 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
MBD1-227ENST00000592060 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
MBD1-227ENST00000592060 KLHL30Q0D2K2 578 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 SPP2Q13103 211 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 ODR4Q5SWX8 454 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 GBP6Q6ZN66 633 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 FAM186BQ8IYM0 893 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 CAPZA3Q96KX2 299 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 AGPAT3Q9NRZ7 376 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 AJAP1Q9UKB5 411 aaPredicted RBP17.26■□□□□ 0.35
MBD1-227ENST00000592060 PNMA2Q9UL42 364 aa17.26■□□□□ 0.35
MBD1-227ENST00000592060 PCDHB13Q9Y5F0 798 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms