RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 LPXNO60711 386 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 PSMD10O75832 226 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 ATP2B1P20020 1258 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 POU3F3P20264 500 aaPredicted RBP15.7■□□□□ 0.1
CLIP3-205ENST00000592017 ATP4AP20648 1035 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 SLC26A2P50443 739 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 PPP4R3AQ6IN85 833 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 MIER3Q7Z3K6 550 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 RSPH3Q86UC2 560 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 IL27Q8NEV9 243 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 ATP8B4Q8TF62 1192 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 IFIH1Q9BYX4 1025 aaKnown RBP15.7■□□□□ 0.1
CLIP3-205ENST00000592017 PCDHA2Q9Y5H9 948 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 CDY2AQ9Y6F7 541 aa15.7■□□□□ 0.1
CLIP3-205ENST00000592017 SPTBN5Q9NRC6 3674 aaKnown RBP15.7■□□□□ 0.1
CLIP3-205ENST00000592017 SFNP31947 248 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 JAK3P52333 1124 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 ERVK-21P61565 698 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 MRPS6P82932 125 aaKnown RBP15.69■□□□□ 0.1
CLIP3-205ENST00000592017 HTRA4P83105 476 aaPredicted RBP15.69■□□□□ 0.1
CLIP3-205ENST00000592017 GRB10Q13322 594 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 FBXO47Q5MNV8 452 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 MICALL1Q8N3F8 863 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 TOP1MTQ969P6 601 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 AGO3Q9H9G7 860 aaKnown RBP15.69■□□□□ 0.1
CLIP3-205ENST00000592017 KIF3AQ9Y496 699 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 INSL6Q9Y581 213 aa15.69■□□□□ 0.1
CLIP3-205ENST00000592017 IGSF9BQ9UPX0 1349 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 ZBTB42B2RXF5 422 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 WNT7AO00755 349 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 HBP1O60381 514 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 PRKCEQ02156 737 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 TMEM62Q0P6H9 643 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 UGCGQ16739 394 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 MTHFD1LQ6UB35 978 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 FBXO18Q8NFZ0 1043 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
CLIP3-205ENST00000592017 APBB2Q92870 758 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 KCNMB3Q9NPA1 279 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 MTUS1Q9ULD2 1270 aa15.68■□□□□ 0.1
CLIP3-205ENST00000592017 MAFBQ9Y5Q3 323 aaPredicted RBP15.68■□□□□ 0.1
CLIP3-205ENST00000592017 GBF1Q92538 1859 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 ENPP3O14638 875 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 NEMFO60524 1076 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 UPP2O95045 317 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 KLRC1P26715 233 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 GJB2P29033 226 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 IER5Q5VY09 327 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 KIAA0319LQ8IZA0 1049 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 BBXQ8WY36 941 aaPredicted RBP15.67■□□□□ 0.1
CLIP3-205ENST00000592017 FAM20AQ96MK3 541 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 TGS1Q96RS0 853 aaKnown RBP15.67■□□□□ 0.1
CLIP3-205ENST00000592017 FOXP1Q9H334 677 aaPredicted RBP15.67■□□□□ 0.1
CLIP3-205ENST00000592017 SMC3Q9UQE7 1217 aa15.67■□□□□ 0.1
CLIP3-205ENST00000592017 SMIM35A0A1B0GVV1 85 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 TBX3O15119 743 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 GTPBP6O43824 516 aaPredicted RBP15.66■□□□□ 0.1
CLIP3-205ENST00000592017 BAG4O95429 457 aaKnown RBP15.66■□□□□ 0.1
CLIP3-205ENST00000592017 OATP04181 439 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 CD52P31358 61 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 CALCRLQ16602 461 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 ZNF484Q5JVG2 852 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 NCAPH2Q6IBW4 605 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 TSHZ1Q6ZSZ6 1077 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 RTN4RL1Q86UN2 441 aaPredicted RBP15.66■□□□□ 0.1
CLIP3-205ENST00000592017 BANK1Q8NDB2 785 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 RDM1Q8NG50 284 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 GDPD5Q8WTR4 605 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 HAS1Q92839 578 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 FAM167AQ96KS9 214 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 C17orf80Q9BSJ5 609 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 VAV3Q9UKW4 847 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 TRPV2Q9Y5S1 764 aa15.66■□□□□ 0.1
CLIP3-205ENST00000592017 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
CLIP3-205ENST00000592017 COL1A2P08123 1366 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 REV3LO60673 3130 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 M0QZ92 97 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 EML1O00423 815 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 ZNF862O60290 1169 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 RPLP2P05387 115 aaKnown RBP15.65■□□□□ 0.1
CLIP3-205ENST00000592017 MCM7P33993 719 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 PPP2R5CQ13362 524 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 MCTP1Q6DN14 999 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 B3GNT9Q6UX72 402 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 NOSTRINQ8IVI9 506 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 SLFN12Q8IYM2 578 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 NME8Q8N427 588 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 ATXN2LQ8WWM7 1075 aaKnown RBP15.65■□□□□ 0.1
CLIP3-205ENST00000592017 LINC01599Q8WXQ3 324 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 YME1L1Q96TA2 773 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 CELF4Q9BZC1 486 aaKnown RBP15.65■□□□□ 0.1
CLIP3-205ENST00000592017 CDHR5Q9HBB8 845 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 THEGQ9P2T0 379 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 SEPT9Q9UHD8 586 aaPredicted RBP15.65■□□□□ 0.1
CLIP3-205ENST00000592017 CEP131Q9UPN4 1083 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.65■□□□□ 0.1
CLIP3-205ENST00000592017 SQORQ9Y6N5 450 aa15.65■□□□□ 0.1
CLIP3-205ENST00000592017 XIRP2A4UGR9 3374 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms