RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ZBED2Q9BTP6 218 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 PRDM12Q9H4Q4 367 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 VAV3Q9UKW4 847 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 TRPV2Q9Y5S1 764 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 SQORQ9Y6N5 450 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 KDM3AQ9Y4C1 1321 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 M0QZ92 97 aa30.68■■■□□ 2.5
SMAD4-213ENST00000591914 HMGN5P82970 282 aaKnown RBP30.68■■■□□ 2.5
SMAD4-213ENST00000591914 TMEM62Q0P6H9 643 aa30.68■■■□□ 2.5
SMAD4-213ENST00000591914 PPP2R5CQ13362 524 aa30.68■■■□□ 2.5
SMAD4-213ENST00000591914 TRMT1LQ7Z2T5 733 aaKnown RBP30.68■■■□□ 2.5
SMAD4-213ENST00000591914 LOC101059915A0A1B0GWI6 518 aaPredicted RBP30.67■■■□□ 2.5
SMAD4-213ENST00000591914 ST18O60284 1047 aa30.67■■■□□ 2.5
SMAD4-213ENST00000591914 ARHGEF15O94989 841 aa30.67■■■□□ 2.5
SMAD4-213ENST00000591914 POTEDQ86YR6 584 aa30.67■■■□□ 2.5
SMAD4-213ENST00000591914 USP38Q8NB14 1042 aa30.67■■■□□ 2.5
SMAD4-213ENST00000591914 TBC1D32Q96NH3 1257 aa30.67■■■□□ 2.5
SMAD4-213ENST00000591914 RAD9AQ99638 391 aa30.67■■■□□ 2.5
SMAD4-213ENST00000591914 CELF4Q9BZC1 486 aaKnown RBP30.67■■■□□ 2.5
SMAD4-213ENST00000591914 NRBP2Q9NSY0 501 aa30.67■■■□□ 2.5
SMAD4-213ENST00000591914 TAP1Q03518 808 aa30.66■■■□□ 2.5
SMAD4-213ENST00000591914 MYOCDQ8IZQ8 938 aa30.66■■■□□ 2.5
SMAD4-213ENST00000591914 C8orf76Q96K31 380 aa30.66■■■□□ 2.5
SMAD4-213ENST00000591914 AGO3Q9H9G7 860 aaKnown RBP30.66■■■□□ 2.5
SMAD4-213ENST00000591914 EVPLQ92817 2033 aa30.66■■■□□ 2.5
SMAD4-213ENST00000591914 LCHNA4D1U4 455 aa30.65■■■□□ 2.5
SMAD4-213ENST00000591914 EML1O00423 815 aa30.65■■■□□ 2.5
SMAD4-213ENST00000591914 MAGEB2O15479 319 aa30.65■■■□□ 2.5
SMAD4-213ENST00000591914 GUCY1B3Q02153 619 aa30.65■■■□□ 2.5
SMAD4-213ENST00000591914 MYO9BQ13459 2157 aa30.64■■■□□ 2.5
SMAD4-213ENST00000591914 SAFBQ15424 915 aaKnown RBP eCLIP30.64■■■□□ 2.5
SMAD4-213ENST00000591914 SLFN12Q8IYM2 578 aa30.64■■■□□ 2.5
SMAD4-213ENST00000591914 MAFAQ8NHW3 353 aaPredicted RBP30.64■■■□□ 2.5
SMAD4-213ENST00000591914 TOP1MTQ969P6 601 aa30.64■■■□□ 2.5
SMAD4-213ENST00000591914 GAS2L1Q99501 681 aaPredicted RBP30.64■■■□□ 2.5
SMAD4-213ENST00000591914 LOXHD1Q8IVV2 1947 aa30.63■■■□□ 2.49
SMAD4-213ENST00000591914 STBD1O95210 358 aa30.63■■■□□ 2.49
SMAD4-213ENST00000591914 CD52P31358 61 aa30.63■■■□□ 2.49
SMAD4-213ENST00000591914 HTRA4P83105 476 aaPredicted RBP30.63■■■□□ 2.49
SMAD4-213ENST00000591914 TARBP2Q15633 366 aaKnown RBP30.63■■■□□ 2.49
SMAD4-213ENST00000591914 XKR3Q5GH77 459 aa30.63■■■□□ 2.49
SMAD4-213ENST00000591914 FAM117BQ6P1L5 589 aa30.63■■■□□ 2.49
SMAD4-213ENST00000591914 LINC01465Q8N7H1 131 aa30.63■■■□□ 2.49
SMAD4-213ENST00000591914 FBXO18Q8NFZ0 1043 aa30.63■■■□□ 2.49
SMAD4-213ENST00000591914 TRANK1O15050 2925 aa30.62■■■□□ 2.49
SMAD4-213ENST00000591914 WNT7AO00755 349 aa30.62■■■□□ 2.49
SMAD4-213ENST00000591914 SPIRE1Q08AE8 756 aa30.62■■■□□ 2.49
SMAD4-213ENST00000591914 ADGRE1Q14246 886 aa30.62■■■□□ 2.49
SMAD4-213ENST00000591914 METTL13Q8N6R0 699 aa30.62■■■□□ 2.49
SMAD4-213ENST00000591914 FAM184AQ8NB25 1140 aa30.62■■■□□ 2.49
SMAD4-213ENST00000591914 NIFKQ9BYG3 293 aaKnown RBP30.62■■■□□ 2.49
SMAD4-213ENST00000591914 INSL6Q9Y581 213 aa30.62■■■□□ 2.49
SMAD4-213ENST00000591914 MARCH6O60337 910 aa30.61■■■□□ 2.49
SMAD4-213ENST00000591914 CD2BP2O95400 341 aaKnown RBP30.61■■■□□ 2.49
SMAD4-213ENST00000591914 BAG4O95429 457 aaKnown RBP30.61■■■□□ 2.49
SMAD4-213ENST00000591914 PSMC5P62195 406 aa30.61■■■□□ 2.49
SMAD4-213ENST00000591914 BANK1Q8NDB2 785 aa30.61■■■□□ 2.49
SMAD4-213ENST00000591914 FOXP1Q9H334 677 aaPredicted RBP30.61■■■□□ 2.49
SMAD4-213ENST00000591914 CDHR5Q9HBB8 845 aa30.61■■■□□ 2.49
SMAD4-213ENST00000591914 PADI3Q9ULW8 664 aa30.61■■■□□ 2.49
SMAD4-213ENST00000591914 CLCN3P51790 818 aa30.6■■■□□ 2.49
SMAD4-213ENST00000591914 EFCAB12Q6NXP0 572 aa30.6■■■□□ 2.49
SMAD4-213ENST00000591914 PRUNE2Q8WUY3 3088 aa30.6■■■□□ 2.49
SMAD4-213ENST00000591914 CEP89Q96ST8 783 aa30.6■■■□□ 2.49
SMAD4-213ENST00000591914 SEPT9Q9UHD8 586 aaPredicted RBP30.6■■■□□ 2.49
SMAD4-213ENST00000591914 ENPP3O14638 875 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 NEMFO60524 1076 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 QARSP47897 775 aaKnown RBP30.59■■■□□ 2.49
SMAD4-213ENST00000591914 PAK2Q13177 524 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 CALCRLQ16602 461 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 SPRED2Q7Z698 418 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 SP7Q8TDD2 431 aaPredicted RBP30.59■■■□□ 2.49
SMAD4-213ENST00000591914 TMX3Q96JJ7 454 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 FTHL17Q9BXU8 183 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 CERS4Q9HA82 394 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 GINS2Q9Y248 185 aa30.59■■■□□ 2.49
SMAD4-213ENST00000591914 COL4A6Q14031 1691 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 LINC01553A4QN01 128 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 TMEM150BA6NC51 233 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 GPR32O75388 356 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 VTNP04004 478 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 TMOD1P28289 359 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 TBC1D8BQ0IIM8 1120 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 EPHA7Q15375 998 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 KIZQ2M2Z5 673 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 LRRC71Q8N4P6 559 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 TMEM40Q8WWA1 233 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 LINC01599Q8WXQ3 324 aa30.58■■■□□ 2.49
SMAD4-213ENST00000591914 EPOPA6NHQ4 379 aa30.57■■■□□ 2.48
SMAD4-213ENST00000591914 UPP2O95045 317 aa30.57■■■□□ 2.48
SMAD4-213ENST00000591914 P4HBP07237 508 aaKnown RBP30.57■■■□□ 2.48
SMAD4-213ENST00000591914 CRYBB1P53674 252 aaPredicted RBP30.57■■■□□ 2.48
SMAD4-213ENST00000591914 MTERF2Q49AM1 385 aa30.57■■■□□ 2.48
SMAD4-213ENST00000591914 FAM43BQ6ZT52 329 aaPredicted RBP30.57■■■□□ 2.48
SMAD4-213ENST00000591914 ANO5Q75V66 913 aa30.57■■■□□ 2.48
SMAD4-213ENST00000591914 ARNTL2Q8WYA1 636 aa30.57■■■□□ 2.48
SMAD4-213ENST00000591914 MTMR9Q96QG7 549 aa30.57■■■□□ 2.48
SMAD4-213ENST00000591914 MAP7D2Q96T17 732 aa30.57■■■□□ 2.48
SMAD4-213ENST00000591914 NOC2LQ9Y3T9 749 aaKnown RBP30.57■■■□□ 2.48
SMAD4-213ENST00000591914 UNC80Q8N2C7 3258 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms