RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 CPXCR1Q8N123 301 aa18.34■□□□□ 0.53
CTDP1-207ENST00000591598 RNF10Q8N5U6 811 aaKnown RBP18.34■□□□□ 0.53
CTDP1-207ENST00000591598 GOLGA5Q8TBA6 731 aa18.34■□□□□ 0.53
CTDP1-207ENST00000591598 CRYGNQ8WXF5 182 aa18.34■□□□□ 0.53
CTDP1-207ENST00000591598 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
CTDP1-207ENST00000591598 SERPINA10Q9UK55 444 aa18.34■□□□□ 0.53
CTDP1-207ENST00000591598 SAMM50Q9Y512 469 aa18.34■□□□□ 0.53
CTDP1-207ENST00000591598 FAM153BP0C7A2 387 aa18.33■□□□□ 0.53
CTDP1-207ENST00000591598 FAM153CQ494X1 144 aa18.33■□□□□ 0.53
CTDP1-207ENST00000591598 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.53
CTDP1-207ENST00000591598 SYCP3Q8IZU3 236 aa18.33■□□□□ 0.53
CTDP1-207ENST00000591598 AENQ8WTP8 325 aaKnown RBP18.33■□□□□ 0.53
CTDP1-207ENST00000591598 FAM153AQ9UHL3 310 aa18.33■□□□□ 0.53
CTDP1-207ENST00000591598 ARFGEF1Q9Y6D6 1849 aa18.33■□□□□ 0.53
CTDP1-207ENST00000591598 FRMD3A2A2Y4 597 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 YDJCA8MPS7 323 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 ARP10275 920 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 RPS6KA1Q15418 735 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 ODR4Q5SWX8 454 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 FAM178BQ8IXR5 827 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 FAM186BQ8IYM0 893 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 TYW1Q9NV66 732 aaKnown RBP18.33■□□□□ 0.52
CTDP1-207ENST00000591598 SCN9AQ15858 1988 aa18.33■□□□□ 0.52
CTDP1-207ENST00000591598 GCOM1H8Y6P7 765 aaPredicted RBP18.32■□□□□ 0.52
CTDP1-207ENST00000591598 LRRN2O75325 713 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 SLITRK3O94933 977 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 POLR2MP0CAP2 368 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 IRF2BP2Q7Z5L9 587 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 FRMD5Q7Z6J6 570 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 ADAT2Q7Z6V5 191 aaKnown RBP18.32■□□□□ 0.52
CTDP1-207ENST00000591598 C10orf67Q8IYJ2 551 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 GMCL1P1Q8NEA9 526 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 SLC35C1Q96A29 364 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 MBOAT7Q96N66 472 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 TMEM39BQ9GZU3 492 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 VIPAS39Q9H9C1 493 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 PDXKO00764 312 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 EYA4O95677 639 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 KRT14P02533 472 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 FAM76AQ8TAV0 307 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 PCIF1Q9H4Z3 704 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 AIPL1Q9NZN9 384 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 WRAP73Q9P2S5 460 aaPredicted RBP18.32■□□□□ 0.52
CTDP1-207ENST00000591598 TRAF3IP3Q9Y228 551 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 PRLRP16471 622 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 PRPF4BQ13523 1007 aaKnown RBP18.32■□□□□ 0.52
CTDP1-207ENST00000591598 NAA35Q5VZE5 725 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 SH2D3CQ8N5H7 860 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 CWC15Q9P013 229 aaKnown RBP18.32■□□□□ 0.52
CTDP1-207ENST00000591598 NAGPAQ9UK23 515 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
CTDP1-207ENST00000591598 ZC3H4Q9UPT8 1303 aaKnown RBP18.31■□□□□ 0.52
CTDP1-207ENST00000591598 TRIM66O15016 1216 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 TBX3O15119 743 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 TGFB1I1O43294 461 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 OTOP1Q7RTM1 612 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 SYN2Q92777 582 aaPredicted RBP18.31■□□□□ 0.52
CTDP1-207ENST00000591598 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
CTDP1-207ENST00000591598 PARVGQ9HBI0 331 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 FOCADQ5VW36 1801 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 TISP43B9A030 160 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 ATP1A2P50993 1020 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 MARSP56192 900 aaKnown RBP18.31■□□□□ 0.52
CTDP1-207ENST00000591598 MOXD1Q6UVY6 613 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 GLYCTKQ8IVS8 523 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
CTDP1-207ENST00000591598 IGLV3-22A0A075B6J6 115 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 DGKZQ13574 1117 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 DAAM2Q86T65 1068 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 ARL8AQ96BM9 186 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 PSD3Q9NYI0 1048 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 HSF2BPO75031 334 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 USP8P40818 1118 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 AARSP49588 968 aaKnown RBP eCLIP18.3■□□□□ 0.52
CTDP1-207ENST00000591598 EPHB4P54760 987 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 EPHA7Q15375 998 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 DLGAP5Q15398 846 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 HS2ST1Q7LGA3 356 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 DDX42Q86XP3 938 aaKnown RBP eCLIP18.3■□□□□ 0.52
CTDP1-207ENST00000591598 PPP1R12BO60237 982 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-207ENST00000591598 FLOT1O75955 427 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 MEI1Q5TIA1 1274 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 EPM2AIP1Q7L775 607 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-207ENST00000591598 IFT20Q8IY31 132 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 OGFOD1Q8N543 542 aa18.3■□□□□ 0.52
CTDP1-207ENST00000591598 ZNF277Q9NRM2 450 aaPredicted RBP18.3■□□□□ 0.52
CTDP1-207ENST00000591598 EXOC3O60645 756 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 LRRC31Q6UY01 552 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 PEX26Q7Z412 305 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 VPS36Q86VN1 386 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 HOOK2Q96ED9 719 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 AGBL1Q96MI9 1066 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 CHORDC1Q9UHD1 332 aaPredicted RBP18.29■□□□□ 0.52
CTDP1-207ENST00000591598 TSKSQ9UJT2 592 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 TMEM150BA6NC51 233 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 RAD51CO43502 376 aa18.29■□□□□ 0.52
CTDP1-207ENST00000591598 HSD17B14Q9BPX1 270 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms