RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 USP49Q70CQ1 688 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 ZNF653Q96CK0 615 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 PAIP2Q9BPZ3 127 aaKnown RBP16.91■□□□□ 0.3
MBD1-224ENST00000591416 MXRA8Q9BRK3 442 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 SNX25Q9H3E2 840 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 PEAK1Q9H792 1746 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 BACE1P56817 501 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 TIPINQ9BVW5 301 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
MBD1-224ENST00000591416 RGPD8O14715 1765 aaPredicted RBP16.91■□□□□ 0.3
MBD1-224ENST00000591416 ARHGEF37A1IGU5 675 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 KRIT1O00522 736 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 TNFAIP2Q03169 654 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 ERO1BQ86YB8 467 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 GMCL1P1Q8NEA9 526 aa16.91■□□□□ 0.3
MBD1-224ENST00000591416 HIP1RO75146 1068 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 NDUFA10O95299 355 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 EHHADHQ08426 723 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 PTPROQ16827 1216 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 NBPF12Q5TAG4 269 aaPredicted RBP16.9■□□□□ 0.3
MBD1-224ENST00000591416 HAUS6Q7Z4H7 955 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 DPF2Q92785 391 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
MBD1-224ENST00000591416 ABCC6O95255 1503 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 NDC80O14777 642 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 INPP5BP32019 993 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 RPS6P62753 249 aaKnown RBP16.9■□□□□ 0.3
MBD1-224ENST00000591416 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 C10orf76Q5T2E6 689 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 LRFN2Q9ULH4 789 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 WNT10BO00744 389 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 DGAT1O75907 488 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 EPHX2P34913 555 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 NTRK3Q16288 839 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 FKBP1CQ5VVH2 108 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 SLC35F6Q8N357 371 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 TOPORSQ9NS56 1045 aaPredicted RBP16.9■□□□□ 0.3
MBD1-224ENST00000591416 ODF2LQ9ULJ1 636 aa16.9■□□□□ 0.3
MBD1-224ENST00000591416 SOWAHDA6NJG2 315 aa16.89■□□□□ 0.3
MBD1-224ENST00000591416 GTF2F1P35269 517 aaKnown RBP eCLIP16.89■□□□□ 0.31e-8■■■□□ 15.2
MBD1-224ENST00000591416 KRT81Q14533 505 aa16.89■□□□□ 0.3
MBD1-224ENST00000591416 MESDQ14696 234 aa16.89■□□□□ 0.3
MBD1-224ENST00000591416 CYFIP1Q7L576 1253 aa16.89■□□□□ 0.3
MBD1-224ENST00000591416 SELENOSQ9BQE4 189 aa16.89■□□□□ 0.3
MBD1-224ENST00000591416 GAKO14976 1311 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 MED7O43513 233 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
MBD1-224ENST00000591416 ZNF568Q3ZCX4 644 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 METTL23Q86XA0 190 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 NSRP1Q9H0G5 558 aaKnown RBP16.89■□□□□ 0.29
MBD1-224ENST00000591416 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
MBD1-224ENST00000591416 RNASELQ05823 741 aaKnown RBP16.89■□□□□ 0.29
MBD1-224ENST00000591416 KCTD17Q8N5Z5 321 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 CCDC89Q8N998 374 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 UBE2Q2LH0YL09 131 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 CELF2O95319 508 aaKnown RBP16.89■□□□□ 0.29
MBD1-224ENST00000591416 IVLP07476 585 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 RNF187Q5TA31 235 aaPredicted RBP16.89■□□□□ 0.29
MBD1-224ENST00000591416 ACRBPQ8NEB7 543 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 GPRC5AQ8NFJ5 357 aa16.89■□□□□ 0.29
MBD1-224ENST00000591416 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.29
MBD1-224ENST00000591416 KIF11P52732 1056 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 NSMCE1Q8WV22 266 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 RIOX1Q9H6W3 641 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 GCLMP48507 274 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 ZNF667Q5HYK9 610 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 FAM213AQ9BRX8 229 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
MBD1-224ENST00000591416 MYCP01106 439 aaPredicted RBP16.88■□□□□ 0.29
MBD1-224ENST00000591416 CD58P19256 250 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 RPA1P27694 616 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 ATRIPQ8WXE1 791 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 CCDC97Q96F63 343 aaPredicted RBP16.88■□□□□ 0.29
MBD1-224ENST00000591416 KCND2Q9NZV8 630 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 CEP72Q9P209 647 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 CDC23Q9UJX2 597 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 IFNB1P01574 187 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 DPYDQ12882 1025 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 SND1Q7KZF4 910 aaKnown RBP eCLIP16.88■□□□□ 0.29
MBD1-224ENST00000591416 SMAP1Q8IYB5 467 aaPredicted RBP16.88■□□□□ 0.29
MBD1-224ENST00000591416 C7orf31Q8N865 590 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 MRPL4Q9BYD3 311 aaKnown RBP16.88■□□□□ 0.29
MBD1-224ENST00000591416 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 ADAMTS1Q9UHI8 967 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 DNAJC12Q9UKB3 198 aa16.88■□□□□ 0.29
MBD1-224ENST00000591416 PDXKO00764 312 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 ZBTB9Q96C00 473 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 MRPL47Q9HD33 250 aaKnown RBP16.87■□□□□ 0.29
MBD1-224ENST00000591416 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 RHOBTB3O94955 611 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 ALKBH5Q6P6C2 394 aaKnown RBP16.87■□□□□ 0.29
MBD1-224ENST00000591416 CROCCP2Q86T23 111 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 CCDC63Q8NA47 563 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 SPTLC3Q9NUV7 552 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 TUBE1Q9UJT0 475 aa16.87■□□□□ 0.29
MBD1-224ENST00000591416 ATP5DP30049 168 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms