RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 GOLGA6L4A6NEF3 574 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 EYA4O95677 639 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 GNAT1P11488 350 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 PFKFB1P16118 471 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 RARRES1P49788 294 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 UBE2HP62256 183 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 HIC1Q14526 733 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 GRIK4Q16099 956 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 E2F4Q16254 413 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 MARCH8Q5T0T0 291 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 RRAGBQ5VZM2 374 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 CCDC73Q6ZRK6 1079 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 VTI1AQ96AJ9 217 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.25
APOC1-206ENST00000590334 CYP26B1Q9NR63 512 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 BLOC1S4Q9NUP1 217 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 SEPT9Q9UHD8 586 aaPredicted RBP13.46□□□□□ -0.25
APOC1-206ENST00000590334 KCNH3Q9ULD8 1083 aa13.46□□□□□ -0.25
APOC1-206ENST00000590334 TNRC18O15417 2968 aaPredicted RBP13.45□□□□□ -0.26
APOC1-206ENST00000590334 MROH7Q68CQ1 1323 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 TANC1Q9C0D5 1861 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 C17orf102A2RUQ5 167 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 CCDC85CA6NKD9 419 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 E9PMD0 336 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 GADD45BO75293 160 aaPredicted RBP13.45□□□□□ -0.26
APOC1-206ENST00000590334 PRPF40AO75400 957 aaKnown RBP13.45□□□□□ -0.26
APOC1-206ENST00000590334 NDUFA8P51970 172 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 PLA2G4FQ68DD2 849 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 GDF6Q6KF10 455 aaPredicted RBP13.45□□□□□ -0.26
APOC1-206ENST00000590334 ANKRD33Q7Z3H0 272 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 SYT2Q8N9I0 419 aaPredicted RBP13.45□□□□□ -0.26
APOC1-206ENST00000590334 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 LMBR1Q8WVP7 490 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 CUEDC2Q9H467 287 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 GOLPH3LQ9H4A5 285 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 PDLIM7Q9NR12 457 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 LMBRD1Q9NUN5 540 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 SETD4Q9NVD3 440 aa13.45□□□□□ -0.26
APOC1-206ENST00000590334 A0A087WWV3 80 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 IGKV6-21A0A0C4DH24 114 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 MAGEB2O15479 319 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 POLR2DO15514 142 aaKnown RBP13.44□□□□□ -0.26
APOC1-206ENST00000590334 MAFO75444 373 aaPredicted RBP13.44□□□□□ -0.26
APOC1-206ENST00000590334 C22orf31O95567 290 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 CD4P01730 458 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 RFC5P40937 340 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 STAT6P42226 847 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 SLC12A3P55017 1021 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 NPEPPSP55786 919 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 SOX10P56693 466 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 CHMP4BP1P59074 171 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
APOC1-206ENST00000590334 MTERF2Q49AM1 385 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 XKR9Q5GH70 373 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 FMR1NBQ8N0W7 255 aaPredicted RBP13.44□□□□□ -0.26
APOC1-206ENST00000590334 PDILTQ8N807 584 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 IQUBQ8NA54 791 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 ENGASEQ8NFI3 743 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 RASSF8Q8NHQ8 419 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 PPP1R13LQ8WUF5 828 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 LARP4BQ92615 738 aaKnown RBP13.44□□□□□ -0.26
APOC1-206ENST00000590334 RAD54LQ92698 747 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 CEP170P1Q96L14 293 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 TOX2Q96NM4 488 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 CTAGE1Q96RT6 745 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 PLIN2Q99541 437 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 PANK2Q9BZ23 570 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 DHX33Q9H6R0 707 aaKnown RBP13.44□□□□□ -0.26
APOC1-206ENST00000590334 MAGEF1Q9HAY2 307 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 USP25Q9UHP3 1055 aa13.44□□□□□ -0.26
APOC1-206ENST00000590334 ARHGEF35A5YM69 484 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 GOLGA6L22H0YM25 854 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 GAS2O43903 313 aaKnown RBP13.43□□□□□ -0.26
APOC1-206ENST00000590334 DGAT1O75907 488 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 PLA2G4BP0C869 781 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 KLRC1P26715 233 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 SYKP43405 635 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 SNW1Q13573 536 aaKnown RBP13.43□□□□□ -0.26
APOC1-206ENST00000590334 LRRC26Q2I0M4 334 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 FAM47CQ5HY64 1035 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 MTHFD1LQ6UB35 978 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 TRMT1LQ7Z2T5 733 aaKnown RBP13.43□□□□□ -0.26
APOC1-206ENST00000590334 SERINC5Q86VE9 423 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 JPH2Q9BR39 696 aaPredicted RBP13.43□□□□□ -0.26
APOC1-206ENST00000590334 SH2D3AQ9BRG2 576 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 KBTBD4Q9NVX7 518 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 KCND2Q9NZV8 630 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 TUBE1Q9UJT0 475 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 PCDHA2Q9Y5H9 948 aa13.43□□□□□ -0.26
APOC1-206ENST00000590334 SMIM35A0A1B0GVV1 85 aa13.42□□□□□ -0.26
APOC1-206ENST00000590334 TREHO43280 583 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms