RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 PLPPR4Q7Z2D5 763 aa27.53■■■□□ 2
RFX1-205ENST00000589239 CCDC43Q96MW1 224 aaKnown RBP27.53■■■□□ 2
RFX1-205ENST00000589239 ANKEF1Q9NU02 776 aa27.53■■■□□ 2
RFX1-205ENST00000589239 Q9Y3F1 56 aa27.53■■■□□ 2
RFX1-205ENST00000589239 MYH9P35579 1960 aaKnown RBP27.53■■■□□ 2
RFX1-205ENST00000589239 RPN1P04843 607 aaKnown RBP27.53■■■□□ 2
RFX1-205ENST00000589239 CACNB1Q02641 598 aaPredicted RBP27.53■■■□□ 2
RFX1-205ENST00000589239 XKR9Q5GH70 373 aa27.53■■■□□ 2
RFX1-205ENST00000589239 LRSAM1Q6UWE0 723 aa27.53■■■□□ 2
RFX1-205ENST00000589239 OTUD6AQ7L8S5 288 aa27.53■■■□□ 2
RFX1-205ENST00000589239 ZSCAN30Q86W11 494 aa27.53■■■□□ 2
RFX1-205ENST00000589239 AP5M1Q9H0R1 490 aa27.53■■■□□ 2
RFX1-205ENST00000589239 SMARCAD1Q9H4L7 1026 aa27.53■■■□□ 2
RFX1-205ENST00000589239 BMP2KQ9NSY1 1161 aaPredicted RBP27.53■■■□□ 2
RFX1-205ENST00000589239 MAN1B1Q9UKM7 699 aa27.53■■■□□ 2
RFX1-205ENST00000589239 TERF1P54274 439 aa27.52■■■□□ 2
RFX1-205ENST00000589239 TYRO3Q06418 890 aa27.52■■■□□ 2
RFX1-205ENST00000589239 DGKDQ16760 1214 aa27.52■■■□□ 2
RFX1-205ENST00000589239 DNAJC19Q96DA6 116 aa27.52■■■□□ 2
RFX1-205ENST00000589239 GSDMAQ96QA5 445 aa27.52■■■□□ 2
RFX1-205ENST00000589239 PTPN22Q9Y2R2 807 aa27.52■■■□□ 2
RFX1-205ENST00000589239 KLRC4O43908 158 aa27.52■■■□□ 2
RFX1-205ENST00000589239 HOXD8P13378 290 aaPredicted RBP27.52■■■□□ 2
RFX1-205ENST00000589239 PADI6Q6TGC4 694 aa27.52■■■□□ 2
RFX1-205ENST00000589239 C1orf186Q6ZWK4 172 aa27.52■■■□□ 2
RFX1-205ENST00000589239 CEP170P1Q96L14 293 aa27.52■■■□□ 2
RFX1-205ENST00000589239 KRT18P05783 430 aaKnown RBP27.51■■□□□ 1.99
RFX1-205ENST00000589239 HSPA8P11142 646 aaKnown RBP27.51■■□□□ 1.99
RFX1-205ENST00000589239 BEX3Q00994 111 aa27.51■■□□□ 1.99
RFX1-205ENST00000589239 C16orf70Q9BSU1 422 aa27.51■■□□□ 1.99
RFX1-205ENST00000589239 POLD4Q9HCU8 107 aa27.51■■□□□ 1.99
RFX1-205ENST00000589239 CCDC192P0DO97 292 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 RARBP10826 455 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 IDEP14735 1019 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 SH3TC2Q8TF17 1288 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 REEP2Q9BRK0 252 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 ERAP1Q9NZ08 941 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 OFD1O75665 1012 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 KMT5BQ4FZB7 885 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 CNNM4Q6P4Q7 775 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 CYP26B1Q9NR63 512 aa27.5■■□□□ 1.99
RFX1-205ENST00000589239 USO1O60763 962 aaKnown RBP27.49■■□□□ 1.99
RFX1-205ENST00000589239 C6orf222P0C671 652 aaPredicted RBP27.49■■□□□ 1.99
RFX1-205ENST00000589239 BMP6P22004 513 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 CPT1AP50416 773 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 GIT2Q14161 759 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 PLCB4Q15147 1175 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 MTERF2Q49AM1 385 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 ANP32BQ92688 251 aaKnown RBP27.49■■□□□ 1.99
RFX1-205ENST00000589239 RNPEPQ9H4A4 650 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 SYNRGQ9UMZ2 1314 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 MYADML2A6NDP7 307 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 PGK1P00558 417 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 SLC26A2P50443 739 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 FSCN1Q16658 493 aaKnown RBP27.49■■□□□ 1.99
RFX1-205ENST00000589239 ATP8B4Q8TF62 1192 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 NRBP2Q9NSY0 501 aa27.49■■□□□ 1.99
RFX1-205ENST00000589239 GJA9P57773 515 aa27.48■■□□□ 1.99
RFX1-205ENST00000589239 MORC3Q14149 939 aa27.48■■□□□ 1.99
RFX1-205ENST00000589239 UNC13DQ70J99 1090 aa27.48■■□□□ 1.99
RFX1-205ENST00000589239 MAEAQ7L5Y9 396 aa27.48■■□□□ 1.99
RFX1-205ENST00000589239 FAM167AQ96KS9 214 aa27.48■■□□□ 1.99
RFX1-205ENST00000589239 NIFKQ9BYG3 293 aaKnown RBP27.48■■□□□ 1.99
RFX1-205ENST00000589239 KCND2Q9NZV8 630 aa27.48■■□□□ 1.99
RFX1-205ENST00000589239 H3BRB1 525 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 HSPA1AP0DMV8 641 aaKnown RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 HSPA1BP0DMV9 641 aaKnown RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 DPCR1Q3MIW9 517 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 BRDTQ58F21 947 aaPredicted RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 BBXQ8WY36 941 aaPredicted RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 TUT1Q9H6E5 874 aaKnown RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 LOXHD1Q8IVV2 1947 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 RSPH10B2B2RC85 870 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 RSPH10BP0C881 870 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 LBX1P52954 281 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 NLRP12P59046 1061 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 STX1AQ16623 288 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 XPNPEP3Q9NQH7 507 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 RMND1Q9NWS8 449 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 DDX20Q9UHI6 824 aaKnown RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 ZNF215Q9UL58 517 aaPredicted RBP27.47■■□□□ 1.99
RFX1-205ENST00000589239 TRPC6Q9Y210 931 aa27.47■■□□□ 1.99
RFX1-205ENST00000589239 PVALEFA0A1B0GWK0 134 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 KCNB1Q14721 858 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 TRIML1Q8N9V2 468 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 HPS3Q969F9 1004 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 TSPY26PQ9H489 355 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 ZHX3Q9H4I2 956 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 HMX1Q9NP08 348 aaPredicted RBP27.46■■□□□ 1.99
RFX1-205ENST00000589239 EXOC1Q9NV70 894 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 PANK4Q9NVE7 773 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 GUCY2CP25092 1073 aa27.46■■□□□ 1.99
RFX1-205ENST00000589239 RHOBTB3O94955 611 aa27.45■■□□□ 1.98
RFX1-205ENST00000589239 ANO6Q4KMQ2 910 aa27.45■■□□□ 1.98
RFX1-205ENST00000589239 GNASQ5JWF2 1037 aa27.45■■□□□ 1.98
RFX1-205ENST00000589239 SMYD4Q8IYR2 804 aaPredicted RBP27.45■■□□□ 1.98
RFX1-205ENST00000589239 UPF3AQ9H1J1 476 aaKnown RBP27.45■■□□□ 1.98
RFX1-205ENST00000589239 DNAJC25Q9H1X3 360 aa27.45■■□□□ 1.98
RFX1-205ENST00000589239 SPC25Q9HBM1 224 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms