RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.16■□□□□ 0.34
ERCC1-209ENST00000589214 BBXQ8WY36 941 aaPredicted RBP17.16■□□□□ 0.34
ERCC1-209ENST00000589214 PPM1EQ8WY54 764 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 ARNTL2Q8WYA1 636 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 MBOAT7Q96N66 472 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.15■□□□□ 0.34
ERCC1-209ENST00000589214 EPOPA6NHQ4 379 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 ZBTB42B2RXF5 422 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 RFXAPO00287 272 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 CCNT1O60563 726 aaKnown RBP17.15■□□□□ 0.34
ERCC1-209ENST00000589214 PSMD10O75832 226 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 SFNP31947 248 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
ERCC1-209ENST00000589214 PRKCEQ02156 737 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 MIER3Q7Z3K6 550 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 ETNPPLQ8TBG4 499 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 FAM167AQ96KS9 214 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 RAD9AQ99638 391 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 LOXHD1Q8IVV2 1947 aa17.15■□□□□ 0.34
ERCC1-209ENST00000589214 ZNF862O60290 1169 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 UPP2O95045 317 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 C22orf31O95567 290 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 OATP04181 439 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 CD52P31358 61 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 MCM2P49736 904 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 MICALL1Q8N3F8 863 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 PPP1R16BQ96T49 567 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
ERCC1-209ENST00000589214 MTUS1Q9ULD2 1270 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 GINS2Q9Y248 185 aa17.14■□□□□ 0.33
ERCC1-209ENST00000589214 EVPLQ92817 2033 aa17.13■□□□□ 0.33
ERCC1-209ENST00000589214 LINC01553A4QN01 128 aa17.13■□□□□ 0.33
ERCC1-209ENST00000589214 WNT7AO00755 349 aa17.13■□□□□ 0.33
ERCC1-209ENST00000589214 GCFC2P16383 781 aaKnown RBP17.13■□□□□ 0.33
ERCC1-209ENST00000589214 ATP2B1P20020 1258 aa17.13■□□□□ 0.33
ERCC1-209ENST00000589214 SAFBQ15424 915 aaKnown RBP eCLIP17.13■□□□□ 0.33
ERCC1-209ENST00000589214 CCDC85BQ15834 202 aaPredicted RBP17.13■□□□□ 0.33
ERCC1-209ENST00000589214 METTL13Q8N6R0 699 aa17.13■□□□□ 0.33
ERCC1-209ENST00000589214 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
ERCC1-209ENST00000589214 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
ERCC1-209ENST00000589214 CELF4Q9BZC1 486 aaKnown RBP17.13■□□□□ 0.33
ERCC1-209ENST00000589214 CLCN3P51790 818 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-209ENST00000589214 PAK2Q13177 524 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 PPP4R3AQ6IN85 833 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 B3GNT9Q6UX72 402 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 KIAA0319LQ8IZA0 1049 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 NME8Q8N427 588 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 RDM1Q8NG50 284 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 TOP1MTQ969P6 601 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 SEPT9Q9UHD8 586 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-209ENST00000589214 INSL6Q9Y581 213 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 COL4A6Q14031 1691 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 KDM3AQ9Y4C1 1321 aa17.12■□□□□ 0.33
ERCC1-209ENST00000589214 MYO9BQ13459 2157 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 VTNP04004 478 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 GJB2P29033 226 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 LRRC71Q8N4P6 559 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 LINC01599Q8WXQ3 324 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 TGS1Q96RS0 853 aaKnown RBP17.11■□□□□ 0.33
ERCC1-209ENST00000589214 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
ERCC1-209ENST00000589214 PRDM6Q9NQX0 595 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 VAV3Q9UKW4 847 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 SQORQ9Y6N5 450 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
ERCC1-209ENST00000589214 TMEM150BA6NC51 233 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-209ENST00000589214 MARCH6O60337 910 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 GRB10Q13322 594 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
ERCC1-209ENST00000589214 KIZQ2M2Z5 673 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
ERCC1-209ENST00000589214 TMEM40Q8WWA1 233 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 HAS1Q92839 578 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 MAP7D2Q96T17 732 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 OSMRQ99650 979 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 CDHR5Q9HBB8 845 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 NRBP2Q9NSY0 501 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 EYSQ5T1H1 3165 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 NLRC5Q86WI3 1866 aa17.1■□□□□ 0.33
ERCC1-209ENST00000589214 EML1O00423 815 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 MAGEB2O15479 319 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 ERVK-21P61565 698 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
ERCC1-209ENST00000589214 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 MTERF2Q49AM1 385 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 AKT3Q9Y243 479 aa17.09■□□□□ 0.33
ERCC1-209ENST00000589214 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms