RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 EVI5O60447 810 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 CLTBP09497 229 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 CYP2C9P11712 490 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 MUTP22033 750 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 UBA7P41226 1012 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 NPEPPSP55786 919 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 TARBP2Q15633 366 aaKnown RBP21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 ZNF579Q8NAF0 562 aaKnown RBP21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 SYMPKQ92797 1274 aaKnown RBP21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 PNMA5Q96PV4 448 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 SCAND2PQ9GZW5 306 aaPredicted RBP21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 DDX19AQ9NUU7 478 aaKnown RBP21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 PCDHA7Q9UN72 937 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 KIAA1024Q9UPX6 916 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 KDM3AQ9Y4C1 1321 aa21.21■□□□□ 0.99
CLPTM1-209ENST00000588855 MBLAC1A4D2B0 266 aaPredicted RBP21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 CUTAO60888 179 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 GRB10Q13322 594 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 HYIQ5T013 277 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 AXDND1Q5T1B0 1012 aaPredicted RBP21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 SH3RF1Q7Z6J0 888 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 SERINC5Q86VE9 423 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 DHX38Q92620 1227 aaKnown RBP21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 WNT8BQ93098 351 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 CEP89Q96ST8 783 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 PLIN2Q99541 437 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 PCDH10Q9P2E7 1040 aa21.2■□□□□ 0.98
CLPTM1-209ENST00000588855 C22orf31O95567 290 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 KLRC1P26715 233 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 KARSQ15046 597 aaKnown RBP21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 MTHFD1LQ6UB35 978 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 RUFY4Q6ZNE9 571 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 KCNK18Q7Z418 384 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 CEP170P1Q96L14 293 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 NACC1Q96RE7 527 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 PRDM5Q9NQX1 630 aaPredicted RBP21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 CYP26B1Q9NR63 512 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 TBX21Q9UL17 535 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 TANC1Q9C0D5 1861 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 PTK7Q13308 1070 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 TMEM119Q4V9L6 283 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 XKR9Q5GH70 373 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 SHC4Q6S5L8 630 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 OTUD6AQ7L8S5 288 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 CDK5RAP3Q96JB5 506 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 CCSER1Q9C0I3 900 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 ANKEF1Q9NU02 776 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 TMEM39AQ9NV64 488 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 LTBP2Q14767 1821 aa21.19■□□□□ 0.98
CLPTM1-209ENST00000588855 E9PMD0 336 aa21.18■□□□□ 0.98
CLPTM1-209ENST00000588855 RARRES1P49788 294 aa21.18■□□□□ 0.98
CLPTM1-209ENST00000588855 RASSF8Q8NHQ8 419 aa21.18■□□□□ 0.98
CLPTM1-209ENST00000588855 CALML4Q96GE6 196 aa21.18■□□□□ 0.98
CLPTM1-209ENST00000588855 CCDC43Q96MW1 224 aaKnown RBP21.18■□□□□ 0.98
CLPTM1-209ENST00000588855 NT5C3AQ9H0P0 336 aa21.18■□□□□ 0.98
CLPTM1-209ENST00000588855 TRIM43BA6NCK2 446 aa21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 SLC26A4O43511 780 aa21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 XRCC6P12956 609 aaKnown RBP eCLIP21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 TBC1D8BQ0IIM8 1120 aa21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 TRIM71Q2Q1W2 868 aaKnown RBP21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 LRRC15Q8TF66 581 aa21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 TRIM43Q96BQ3 446 aaPredicted RBP21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 NOC4LQ9BVI4 516 aaKnown RBP21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 BMP2KQ9NSY1 1161 aaPredicted RBP21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 DBR1Q9UK59 544 aaKnown RBP21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 PCDHA2Q9Y5H9 948 aa21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 SIP14410 1827 aa21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 UMODL1Q5DID0 1318 aa21.17■□□□□ 0.98
CLPTM1-209ENST00000588855 PDE4DIPQ5VU43 2346 aa21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 PLCG1P19174 1290 aa21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 TXLNAP40222 546 aa21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 LRRC71Q8N4P6 559 aa21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 PPP1R12CQ9BZL4 782 aa21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 FAM49AQ9H0Q0 323 aaPredicted RBP21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 HIPK3Q9H422 1215 aa21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 ZMYND8Q9ULU4 1186 aaPredicted RBP21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 DNM3Q9UQ16 869 aa21.16■□□□□ 0.98
CLPTM1-209ENST00000588855 A0A087X0B3 334 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 KIAA0355O15063 1070 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 MAGEB2O15479 319 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 MAFO75444 373 aaPredicted RBP21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 SYN1P17600 705 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 CLCN3P51790 818 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 TAF2Q6P1X5 1199 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 LINC01465Q8N7H1 131 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 DNAJB3Q8WWF6 145 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 BHMT2Q9H2M3 363 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 DHX33Q9H6R0 707 aaKnown RBP21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 CEP290O15078 2479 aa21.15■□□□□ 0.98
CLPTM1-209ENST00000588855 SMIM35A0A1B0GVV1 85 aa21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 EYA4O95677 639 aa21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 ITGB8P26012 769 aa21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 POLGP54098 1239 aaPredicted RBP21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 MLLT1Q03111 559 aaPredicted RBP21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 RESP18Q5W5W9 173 aa21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 ADALQ6DHV7 355 aa21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 EFCAB12Q6NXP0 572 aa21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 METTL13Q8N6R0 699 aa21.14■□□□□ 0.98
CLPTM1-209ENST00000588855 CAGE1Q8TC20 777 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms