RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 EXOC8Q8IYI6 725 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 SMYD4Q8IYR2 804 aaPredicted RBP11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 SLC17A8Q8NDX2 589 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 P2RX5Q93086 422 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 MRFAP1L1Q96HT8 127 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 MAML3Q96JK9 1138 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 CTAGE1Q96RT6 745 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 TSG101Q99816 390 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 REEP2Q9BRK0 252 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 TINF2Q9BSI4 451 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 AZI2Q9H6S1 392 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 LARSQ9P2J5 1176 aaKnown RBP11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 WRAP73Q9P2S5 460 aaPredicted RBP11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 CTNND2Q9UQB3 1225 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 PPME1Q9Y570 386 aa11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 MAFBQ9Y5Q3 323 aaPredicted RBP11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 ZNFX1Q9P2E3 1918 aaKnown RBP11.64□□□□□ -0.55
CHMP1B-202ENST00000588284 NPHP3-ACAD11A0A0J9YXS1 232 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 GSTTP1A0A1W2PQM5 241 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 NOP56O00567 594 aaKnown RBP11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 ZBTB39O15060 712 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 SERPINC1P01008 464 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 GH1P01241 217 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 MAPTP10636 758 aaKnown RBP11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 RGS2P41220 211 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 STAT5BP51692 787 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 STX17P56962 302 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 FANCCQ00597 558 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 SP4Q02446 784 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 GRM1Q13255 1194 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 CRHR2Q13324 411 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 LY6KQ17RY6 165 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 FILIP1LQ4L180 1135 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 IER5LQ5T953 404 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 PLPPR4Q7Z2D5 763 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 FAM114A1Q8IWE2 563 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 SOCS4Q8WXH5 440 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 TRIM44Q96DX7 344 aaPredicted RBP11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 FAM167AQ96KS9 214 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 CAPNS2Q96L46 248 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 RUSC1Q9BVN2 902 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 PARVGQ9HBI0 331 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 OLFML3Q9NRN5 406 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 RYDENQ9NUL5 291 aaKnown RBP11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 MAPK8IP1Q9UQF2 711 aa11.63□□□□□ -0.55
CHMP1B-202ENST00000588284 TNPO2O14787 897 aaKnown RBP11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 SNAI1O95863 264 aaPredicted RBP11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 ZNF18P17022 549 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 CDC25BP30305 580 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 MAP2K2P36507 400 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 SLC26A2P50443 739 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 ZNF131P52739 623 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 FCGRTP55899 365 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 UBASH3AP57075 661 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 LRRC63Q05C16 580 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 RAD51AP2Q09MP3 1159 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 ACVR2BQ13705 512 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 ALCAMQ13740 583 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 KIF22Q14807 665 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 HS1BP3Q53T59 392 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 TAPT1Q6NXT6 567 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 FBXO16Q8IX29 292 aaPredicted RBP11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 DRC7Q8IY82 874 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 KIAA0895Q8NCT3 520 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 CEP170P1Q96L14 293 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 TRIM47Q96LD4 638 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 SPATA33Q96N06 139 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 SMARCAD1Q9H4L7 1026 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 THAP9Q9H5L6 903 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 BCAS3Q9H6U6 928 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 MRPL44Q9H9J2 332 aaKnown RBP11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 C17orf75Q9HAS0 396 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 MAGEC2Q9UBF1 373 aaPredicted RBP11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 PCDHA2Q9Y5H9 948 aa11.62□□□□□ -0.55
CHMP1B-202ENST00000588284 LCTP09848 1927 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 LRRC10BA6NIK2 292 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 EIF3DO15371 548 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 AP5Z1O43299 807 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 ZNF862O60290 1169 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 HIP1RO75146 1068 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 LGR5O75473 907 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 DGAT1O75907 488 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 STBD1O95210 358 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 OATP04181 439 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 PTMAP06454 111 aaKnown RBP11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 TPM2P07951 284 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 ABCD1P33897 745 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 UGCGQ16739 394 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 CDKAL1Q5VV42 579 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 ANKRD40Q6AI12 368 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 TTI2Q6NXR4 508 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 ANO5Q75V66 913 aa11.61□□□□□ -0.55
CHMP1B-202ENST00000588284 SFR1Q86XK3 245 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms