RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 EDIL3O43854 480 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 NPAS4Q8IUM7 802 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 CKAP2LQ8IYA6 745 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 KIAA0319LQ8IZA0 1049 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 UPF3BQ9BZI7 483 aaKnown RBP21.28■■□□□ 1
TRIM47-205ENST00000587774 TCEAL9Q9UHQ7 104 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 GINS2Q9Y248 185 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 RWDD3Q9Y3V2 267 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 CYP46A1Q9Y6A2 500 aa21.28■■□□□ 1
TRIM47-205ENST00000587774 C22orf31O95567 290 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 PSAPP07602 524 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 BMPR1AP36894 532 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 TCEAL5Q5H9L2 206 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 TRMT1LQ7Z2T5 733 aaKnown RBP21.27■■□□□ 1
TRIM47-205ENST00000587774 TMEM40Q8WWA1 233 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 BBXQ8WY36 941 aaPredicted RBP21.27■■□□□ 1
TRIM47-205ENST00000587774 LARP6Q9BRS8 491 aaKnown RBP21.27■■□□□ 1
TRIM47-205ENST00000587774 C11orf84Q9BUA3 381 aaPredicted RBP21.27■■□□□ 1
TRIM47-205ENST00000587774 NSUN3Q9H649 340 aaKnown RBP21.27■■□□□ 1
TRIM47-205ENST00000587774 CDHR5Q9HBB8 845 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 SH3GLB2Q9NR46 395 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 GABBR1Q9UBS5 961 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 PCDHA10Q9Y5I2 948 aa21.27■■□□□ 1
TRIM47-205ENST00000587774 GRM6O15303 877 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 RB1P06400 928 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 NLRP5P59047 1200 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 NFX1Q12986 1120 aaKnown RBP21.26■□□□□ 0.99
TRIM47-205ENST00000587774 LEXMQ3ZCV2 418 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 TRIM22Q8IYM9 498 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 PPP1R16BQ96T49 567 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 ERVK-5Q9HDB9 667 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 NOC2LQ9Y3T9 749 aaKnown RBP21.26■□□□□ 0.99
TRIM47-205ENST00000587774 SAMM50Q9Y512 469 aa21.26■□□□□ 0.99
TRIM47-205ENST00000587774 MRPL42Q9Y6G3 142 aaKnown RBP21.26■□□□□ 0.99
TRIM47-205ENST00000587774 WDR64B1ANS9 1081 aa21.25■□□□□ 0.99
TRIM47-205ENST00000587774 MSH4O15457 936 aa21.25■□□□□ 0.99
TRIM47-205ENST00000587774 MGEA5O60502 916 aa21.25■□□□□ 0.99
TRIM47-205ENST00000587774 SSRP1Q08945 709 aaKnown RBP21.25■□□□□ 0.99
TRIM47-205ENST00000587774 PAN2Q504Q3 1202 aaKnown RBP21.25■□□□□ 0.99
TRIM47-205ENST00000587774 CMTR2Q8IYT2 770 aaKnown RBP21.25■□□□□ 0.99
TRIM47-205ENST00000587774 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.25■□□□□ 0.99
TRIM47-205ENST00000587774 TM6SF1Q9BZW5 370 aa21.25■□□□□ 0.99
TRIM47-205ENST00000587774 RPS6KA5O75582 802 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 VTNP04004 478 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 GATMP50440 423 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 STK3Q13188 491 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 KIZQ2M2Z5 673 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 NEK9Q8TD19 979 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 TBCKQ8TEA7 893 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 PABPC5Q96DU9 382 aaKnown RBP21.24■□□□□ 0.99
TRIM47-205ENST00000587774 ZNF274Q96GC6 653 aaPredicted RBP21.24■□□□□ 0.99
TRIM47-205ENST00000587774 OSMRQ99650 979 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 LMAN2LQ9H0V9 348 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 PCDHA4Q9UN74 947 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 CEP131Q9UPN4 1083 aa21.24■□□□□ 0.99
TRIM47-205ENST00000587774 H3BQ06 376 aaPredicted RBP21.23■□□□□ 0.99
TRIM47-205ENST00000587774 CPLX1O14810 134 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 CHMP2AO43633 222 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 ZNF862O60290 1169 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 CSPG5O95196 566 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 DEXIO95424 95 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 MMP1P03956 469 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 STAG3L1P0CL83 205 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 IL9P15248 144 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 IBSPP21815 317 aaPredicted RBP21.23■□□□□ 0.99
TRIM47-205ENST00000587774 USP11P51784 963 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 COL19A1Q14993 1142 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 METTL13Q8N6R0 699 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 SLC5A5Q92911 643 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 GJA10Q969M2 543 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 FAM167AQ96KS9 214 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 AIFM3Q96NN9 605 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 PLVAPQ9BX97 442 aa21.23■□□□□ 0.99
TRIM47-205ENST00000587774 M0R2N6 131 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 GAS7O60861 476 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 OATP04181 439 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 SARSP49591 514 aaKnown RBP21.22■□□□□ 0.99
TRIM47-205ENST00000587774 CLCN3P51790 818 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 PRKCEQ02156 737 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 NPY5RQ15761 445 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 UGCGQ16739 394 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 LRCH2Q5VUJ6 765 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 PTCRAQ6ISU1 281 aaPredicted RBP21.22■□□□□ 0.99
TRIM47-205ENST00000587774 FAM228AQ86W67 206 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 RIT2Q99578 217 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 UNC45AQ9H3U1 944 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 ALG13Q9NP73 1137 aaKnown RBP21.22■□□□□ 0.99
TRIM47-205ENST00000587774 DISC1Q9NRI5 854 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 LRFN2Q9ULH4 789 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 ST3GAL5Q9UNP4 418 aa21.22■□□□□ 0.99
TRIM47-205ENST00000587774 DENND3A2RUS2 1198 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 GPR32O75388 356 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 TDP2O95551 362 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 NEFLP07196 543 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 COL9A1P20849 921 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 CRYBB1P53674 252 aaPredicted RBP21.21■□□□□ 0.99
TRIM47-205ENST00000587774 EP400NLQ6ZTU2 488 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 BLIDQ8IZY5 108 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 DAGLBQ8NCG7 672 aa21.21■□□□□ 0.99
TRIM47-205ENST00000587774 KHSRPQ92945 711 aaKnown RBP eCLIP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms