RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NR3C1P04150 777 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 STAT1P42224 750 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 PTGISQ16647 500 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 AGBL2Q5U5Z8 902 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 STXBP4Q6ZWJ1 553 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 CATSPER3Q86XQ3 398 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 KLHL7Q8IXQ5 586 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 OTUD6BQ8N6M0 293 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 RNPC3Q96LT9 517 aaKnown RBP20.27■□□□□ 0.84
DDX39A-206ENST00000587730 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 ESYT3A0FGR9 886 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
DDX39A-206ENST00000587730 CIITAP33076 1130 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 SREBF1P36956 1147 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 ITGB3BPQ13352 177 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-206ENST00000587730 SLC15A2Q16348 729 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 CEP85LQ5SZL2 805 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 SFR1Q86XK3 245 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 SEC14L1Q92503 715 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 REEP2Q9BRK0 252 aa20.27■□□□□ 0.84
DDX39A-206ENST00000587730 LRRC37AA6NMS7 1700 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 NPHP3-ACAD11A0A0J9YXS1 232 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-206ENST00000587730 POTEFA5A3E0 1075 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 FAM107AO95990 144 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 SERPINB2P05120 415 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 POTEIP0CG38 1075 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 SLC9A1P19634 815 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 RFX1P22670 979 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
DDX39A-206ENST00000587730 SLC16A2P36021 539 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 ERVK-9P63128 1117 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 PLCB4Q15147 1175 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 KCTD16Q68DU8 428 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 POTEGQ6S5H5 508 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 POTEEQ6S8J3 1075 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 KCTD1Q719H9 257 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 VTI1AQ96AJ9 217 aa20.26■□□□□ 0.83
DDX39A-206ENST00000587730 NOC2LQ9Y3T9 749 aaKnown RBP20.26■□□□□ 0.83
DDX39A-206ENST00000587730 SPDYE3A6NKU9 549 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L15C9J2P7 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L13C9JLJ4 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L11C9JVI0 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L18D6R9N7 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L22D6RA61 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L17D6RBQ6 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L19D6RCP7 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L20D6RJB6 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 KRIT1O00522 736 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 SART1O43290 800 aaKnown RBP20.25■□□□□ 0.83
DDX39A-206ENST00000587730 FSBPO95073 299 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 EYA4O95677 639 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 MUTP22033 750 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 MMP14P50281 582 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 DNA2P51530 1060 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 EIF3BP55884 814 aaKnown RBP20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L24Q0WX57 530 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 USP17L6PQ6QN14 398 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 AMIGO3Q86WK7 504 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 SH2D3CQ8N5H7 860 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 DDX4Q9NQI0 724 aaKnown RBP20.25■□□□□ 0.83
DDX39A-206ENST00000587730 SEL1LQ9UBV2 794 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 STXBP5LQ9Y2K9 1186 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 MYH7BA7E2Y1 1941 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 NCANO14594 1321 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 ZSCAN5CA6NGD5 496 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-206ENST00000587730 HSD17B3P37058 310 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 ATP1A2P50993 1020 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 NAA35Q5VZE5 725 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 GPIHBP1Q8IV16 184 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 SLC35C1Q96A29 364 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 RAB17Q9H0T7 212 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 LRRC4BQ9NT99 713 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 GCNT4Q9P109 453 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 AMFRQ9UKV5 643 aa20.25■□□□□ 0.83
DDX39A-206ENST00000587730 PACSIN2Q9UNF0 486 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-206ENST00000587730 UTP11Q9Y3A2 253 aaKnown RBP20.25■□□□□ 0.83
DDX39A-206ENST00000587730 TMCO5BA8MYB1 307 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 MEIS2O14770 477 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 AKAP3O75969 853 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 SPATA31C1P0DKV0 1188 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 CTNNA1P35221 906 aaKnown RBP20.24■□□□□ 0.83
DDX39A-206ENST00000587730 PSMC2P35998 433 aaKnown RBP20.24■□□□□ 0.83
DDX39A-206ENST00000587730 EN1Q05925 392 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-206ENST00000587730 ENOX2Q16206 610 aaKnown RBP20.24■□□□□ 0.83
DDX39A-206ENST00000587730 PRR16Q569H4 304 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 DCAF17Q5H9S7 520 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-206ENST00000587730 SLFN13Q68D06 897 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 NLRP14Q86W24 1093 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 METTL13Q8N6R0 699 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 HES6Q96HZ4 224 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 MRIQ9BWK5 157 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 SYNPO2Q9UMS6 1093 aa20.24■□□□□ 0.83
DDX39A-206ENST00000587730 NPM3O75607 178 aaKnown RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 CYP3A4P08684 503 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 TMEM253P0C7T8 217 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 ZBTB48P10074 688 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-206ENST00000587730 ACTN1P12814 892 aa20.23■□□□□ 0.83
DDX39A-206ENST00000587730 ECHS1P30084 290 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms