RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 MAEAQ7L5Y9 396 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 CCDC60Q8IWA6 550 aaPredicted RBP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 DAW1Q8N136 415 aa21.92■■□□□ 1.1
TRIM47-204ENST00000587339 C17orf53Q8N3J3 647 aaPredicted RBP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 NOC4LQ9BVI4 516 aaKnown RBP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 LARSQ9P2J5 1176 aaKnown RBP21.92■■□□□ 1.1
TRIM47-204ENST00000587339 BACH1O14867 736 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 ZNF862O60290 1169 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 SUPT20HL2P0C7V6 817 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 NMT1P30419 496 aaKnown RBP21.91■■□□□ 1.1
TRIM47-204ENST00000587339 DNM2P50570 870 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 NOLC1Q14978 699 aaKnown RBP eCLIP21.91■■□□□ 1.1
TRIM47-204ENST00000587339 STXBP4Q6ZWJ1 553 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 PPFIBP1Q86W92 1011 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 CEP63Q96MT8 703 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 FIZ1Q96SL8 496 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 TIPINQ9BVW5 301 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 TRAF3IP3Q9Y228 551 aa21.91■■□□□ 1.1
TRIM47-204ENST00000587339 LOC102724159A0A0B4J2E5 919 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 PDXKO00764 312 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 HOXD13P35453 343 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 NPEPPSP55786 919 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 PWP2Q15269 919 aaKnown RBP21.9■■□□□ 1.1
TRIM47-204ENST00000587339 ZNF720Q7Z2F6 126 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.9■■□□□ 1.1
TRIM47-204ENST00000587339 SYNGAP1Q96PV0 1343 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 DOCK5Q9H7D0 1870 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 FARP2O94887 1054 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-204ENST00000587339 ATG7O95352 703 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 ZNF157P51786 506 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-204ENST00000587339 GOLGA8FQ08AF8 430 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 GOLGA8DPQ0D2H9 430 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 ADAM9Q13443 819 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 KCNV1Q6PIU1 500 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 CCDC112Q8NEF3 446 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 IVNS1ABPQ9Y6Y0 642 aa21.9■■□□□ 1.1
TRIM47-204ENST00000587339 A0A1W2PQC6 194 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 CALUO43852 315 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-204ENST00000587339 GNA14O95837 355 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 ADKP55263 362 aaKnown RBP21.89■■□□□ 1.09
TRIM47-204ENST00000587339 RBL2Q08999 1139 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 ZC2HC1CQ53FD0 456 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-204ENST00000587339 MIIPQ5JXC2 388 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 TC2NQ8N9U0 490 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 CEP170P1Q96L14 293 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 DRC1Q96MC2 740 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 TYW1Q9NV66 732 aaKnown RBP21.89■■□□□ 1.09
TRIM47-204ENST00000587339 LRRC37A2A6NM11 1700 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 IGSF9BQ9UPX0 1349 aa21.89■■□□□ 1.09
TRIM47-204ENST00000587339 ASB14A6NK59 587 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 AKR1B15C9JRZ8 316 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-204ENST00000587339 STRNO43815 780 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 TPM1P09493 284 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 NR2F2P24468 414 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 PRKCEQ02156 737 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 KCNA1Q09470 495 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 TBC1D8BQ0IIM8 1120 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 MAN2A1Q16706 1144 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 CEP135Q66GS9 1140 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 MORC4Q8TE76 937 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 ZNF302Q9NR11 478 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 PCDHB13Q9Y5F0 798 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 CETN3O15182 167 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 NKRFO15226 690 aaKnown RBP eCLIP21.88■■□□□ 1.09
TRIM47-204ENST00000587339 GGPS1O95749 300 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 ADORA2AP29274 412 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 LY6KQ17RY6 165 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 FAM110CQ1W6H9 321 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 CCDC40Q4G0X9 1142 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 METTL7BQ6UX53 244 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 ZC3H3Q8IXZ2 948 aaKnown RBP21.88■■□□□ 1.09
TRIM47-204ENST00000587339 ABRAQ8N0Z2 381 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 CPLX3Q8WVH0 158 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 MLXIPQ9HAP2 919 aa21.88■■□□□ 1.09
TRIM47-204ENST00000587339 SEPT9Q9UHD8 586 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-204ENST00000587339 MAFBQ9Y5Q3 323 aaPredicted RBP21.88■■□□□ 1.09
TRIM47-204ENST00000587339 UBE4BO95155 1302 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 STBD1O95210 358 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 GYPCP04921 128 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 PLS3P13797 630 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 TRIM14Q14142 442 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 VWA3BQ502W6 1294 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 XKR3Q5GH77 459 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 FKBP15Q5T1M5 1219 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 RASAL3Q86YV0 1011 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 TMX1Q9H3N1 280 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 NDST4Q9H3R1 872 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 SPTLC3Q9NUV7 552 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 DDX41Q9UJV9 622 aaKnown RBP21.87■■□□□ 1.09
TRIM47-204ENST00000587339 TRPM7Q96QT4 1865 aa21.87■■□□□ 1.09
TRIM47-204ENST00000587339 CASP14P31944 242 aa21.86■■□□□ 1.09
TRIM47-204ENST00000587339 FAM102BQ5T8I3 360 aa21.86■■□□□ 1.09
TRIM47-204ENST00000587339 SAPCD2Q86UD0 394 aa21.86■■□□□ 1.09
TRIM47-204ENST00000587339 FBXO16Q8IX29 292 aaPredicted RBP21.86■■□□□ 1.09
TRIM47-204ENST00000587339 K7ENM7 598 aa21.86■■□□□ 1.09
TRIM47-204ENST00000587339 ARIH2O95376 493 aa21.86■■□□□ 1.09
TRIM47-204ENST00000587339 MAPTP10636 758 aaKnown RBP21.86■■□□□ 1.09
TRIM47-204ENST00000587339 RPL13P26373 211 aaKnown RBP21.86■■□□□ 1.09
TRIM47-204ENST00000587339 MARSP56192 900 aaKnown RBP21.86■■□□□ 1.09
TRIM47-204ENST00000587339 ZNF792Q3KQV3 632 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms