RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 OATP04181 439 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 IGBP1P78318 339 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 NUCB2P80303 420 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 DEFB103AP81534 67 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 MRPS6P82932 125 aaKnown RBP9.73□□□□□ -0.85
ATG4D-202ENST00000585437 TRIM29Q14134 588 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 ZNF484Q5JVG2 852 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 FBXO47Q5MNV8 452 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 RSPH3Q86UC2 560 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 POTEDQ86YR6 584 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 HERC6Q8IVU3 1022 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 DBF4BQ8NFT6 615 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 FBXO18Q8NFZ0 1043 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 APBB2Q92870 758 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 FAM167AQ96KS9 214 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 CEP89Q96ST8 783 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 STXBP5LQ9Y2K9 1186 aa9.73□□□□□ -0.85
ATG4D-202ENST00000585437 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.72□□□□□ -0.85
ATG4D-202ENST00000585437 EML1O00423 815 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 CHMP2AO43633 222 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 CCNT1O60563 726 aaKnown RBP9.72□□□□□ -0.85
ATG4D-202ENST00000585437 KLRC1P26715 233 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 PRKCEQ02156 737 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 IKBKEQ14164 716 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 LPIN1Q14693 890 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 TARBP2Q15633 366 aaKnown RBP9.72□□□□□ -0.85
ATG4D-202ENST00000585437 TSHZ1Q6ZSZ6 1077 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 MIER3Q7Z3K6 550 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 KIAA0319LQ8IZA0 1049 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 SEPT8Q92599 483 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 TMX3Q96JJ7 454 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 C8orf76Q96K31 380 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 IFIH1Q9BYX4 1025 aaKnown RBP9.72□□□□□ -0.85
ATG4D-202ENST00000585437 FOXP1Q9H334 677 aaPredicted RBP9.72□□□□□ -0.85
ATG4D-202ENST00000585437 ZNF576Q9H609 170 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 MSRAQ9UJ68 235 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 CEP131Q9UPN4 1083 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 CDY2AQ9Y6F7 541 aa9.72□□□□□ -0.85
ATG4D-202ENST00000585437 PLXNA4Q9HCM2 1894 aa9.71□□□□□ -0.85
ATG4D-202ENST00000585437 GOLGA6L22H0YM25 854 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 GJB5O95377 273 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 GHRP10912 638 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 MYOGP15173 224 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 U2AF2P26368 475 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 KCNJ6P48051 423 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 RABGGTBP53611 331 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 HTRA4P83105 476 aaPredicted RBP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 IER5Q5VY09 327 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 SLFN12Q8IYM2 578 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 NME8Q8N427 588 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 USP38Q8NB14 1042 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 INTS4Q96HW7 963 aaKnown RBP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 MTMR9Q96QG7 549 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 CDX2Q99626 313 aaPredicted RBP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 NIFKQ9BYG3 293 aaKnown RBP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 FAM49AQ9H0Q0 323 aaPredicted RBP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 NKX2-4Q9H2Z4 354 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 RC3H2Q9HBD1 1191 aaKnown RBP9.71□□□□□ -0.86
ATG4D-202ENST00000585437 TRPV2Q9Y5S1 764 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 MYO9BQ13459 2157 aa9.71□□□□□ -0.86
ATG4D-202ENST00000585437 IGKV6-21A0A0C4DH24 114 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 KIF28PB7ZC32 967 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 MAGEB2O15479 319 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 NEMFO60524 1076 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 CA3P07451 260 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 FOSBP53539 338 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 GUCY1B3Q02153 619 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 GRIN2CQ14957 1233 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 SAFBQ15424 915 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 XKR3Q5GH77 459 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 FAM43BQ6ZT52 329 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 ANO5Q75V66 913 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 TMCO2Q7Z6W1 182 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 NOSTRINQ8IVI9 506 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 CKAP2LQ8IYA6 745 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 SP7Q8TDD2 431 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 TMEM40Q8WWA1 233 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 LINC01599Q8WXQ3 324 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 CELF4Q9BZC1 486 aaKnown RBP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 AGO3Q9H9G7 860 aaKnown RBP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 SLC28A3Q9HAS3 691 aa9.7□□□□□ -0.86
ATG4D-202ENST00000585437 WRAP73Q9P2S5 460 aaPredicted RBP9.7□□□□□ -0.86
ATG4D-202ENST00000585437 XIRP2A4UGR9 3374 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 LCHNA4D1U4 455 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 TMEM150BA6NC51 233 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 M0QZ92 97 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 P4HBP07237 508 aaKnown RBP9.69□□□□□ -0.86
ATG4D-202ENST00000585437 MCM4P33991 863 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 MYH11P35749 1972 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 QARSP47897 775 aaKnown RBP9.69□□□□□ -0.86
ATG4D-202ENST00000585437 TRAPPC10P48553 1259 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 PSMC5P62195 406 aa9.69□□□□□ -0.86
ATG4D-202ENST00000585437 TAP1Q03518 808 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms