RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 BHMG1C9JSJ3 638 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 POLRMTO00411 1230 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CEP104O60308 925 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SREBF1P36956 1147 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SLFN11Q7Z7L1 901 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ATP6V1G3Q96LB4 118 aa15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RNPC3Q96LT9 517 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-237ENST00000585163 A0A0A6YYK5 440 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 GTPBP10A4D1E9 387 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RSPH10B2B2RC85 870 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 PGRMC1O00264 195 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 FOSP01100 380 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RSPH10BP0C881 870 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CASP4P49662 377 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 TCERG1LQ5VWI1 586 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 VPS36Q86VN1 386 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 DNAAF5Q86Y56 855 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SIAH1Q8IUQ4 282 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 METTL13Q8N6R0 699 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.074e-16■□□□□ 11
CDK5RAP3-237ENST00000585163 USP21Q9UK80 565 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 AJAP1Q9UKB5 411 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SPDYE3A6NKU9 549 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 HMGB1P1B2RPK0 211 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 NDUFAB1O14561 156 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 NR1D1P20393 614 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CIITAP33076 1130 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CERKLQ49MI3 558 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 LMBR1Q8WVP7 490 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 BHMT2Q9H2M3 363 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 GCNT4Q9P109 453 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 VAV3Q9UKW4 847 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 INTUQ9ULD6 942 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 PLAAQ9Y263 795 aa15.5■□□□□ 0.07
CDK5RAP3-237ENST00000585163 FAM196BA6NMK8 535 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 MSH4O15457 936 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SART1O43290 800 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 H2AFZP0C0S5 128 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 LSP1P33241 339 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 HLTFQ14527 1009 aaKnown RBP eCLIP15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 DOK7Q18PE1 504 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 H2AFVQ71UI9 128 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 POLR3CQ9BUI4 534 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 OLFML3Q9NRN5 406 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 STXBP5LQ9Y2K9 1186 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CCDC188H7C350 402 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 TBCAO75347 108 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 GCNT3O95395 438 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CYP4A11Q02928 519 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 KCNA1Q09470 495 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 LRIG3Q6UXM1 1119 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 PEX26Q7Z412 305 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 FBXO11Q86XK2 927 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RASGEF1CQ8N431 466 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 BORCS6Q96GS4 357 aa15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SUCLA2Q9P2R7 463 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 NOC2LQ9Y3T9 749 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-237ENST00000585163 DDX3XO00571 662 aaKnown RBP eCLIP15.48■□□□□ 0.071e-8■■■□□ 15.4
CDK5RAP3-237ENST00000585163 TGFB1I1O43294 461 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 EYA4O95677 639 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CRKP46108 304 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 NPEPPSP55786 919 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 GUCY1A3Q02108 690 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ITGB3BPQ13352 177 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CEP85LQ5SZL2 805 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 B4GALNT4Q76KP1 1039 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SYCE1Q8N0S2 351 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 KCTD17Q8N5Z5 321 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ZDHHC15Q96MV8 337 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 AP1M1Q9BXS5 423 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 EPN3Q9H201 632 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 BCAS3Q9H6U6 928 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 TMBIM4Q9HC24 238 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 PI4KBQ9UBF8 816 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 RABGAP1Q9Y3P9 1069 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SAMM50Q9Y512 469 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 DDTLA6NHG4 134 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 F5H6K3 240 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 CLIC2O15247 247 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 FERP16591 822 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 HSD17B3P37058 310 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 SNAP25P60880 206 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 KLRC3Q07444 240 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 USH1GQ495M9 461 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 MAATS1Q7Z4T9 603 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 LRRC45Q96CN5 670 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 EIF2AK1Q9BQI3 630 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ATXN2Q99700 1313 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-237ENST00000585163 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
CDK5RAP3-237ENST00000585163 H0YGN5 161 aa15.47■□□□□ 0.07
CDK5RAP3-237ENST00000585163 TOM1O60784 492 aa15.47■□□□□ 0.07
CDK5RAP3-237ENST00000585163 PPP1R37O75864 691 aa15.47■□□□□ 0.07
CDK5RAP3-237ENST00000585163 GAP43P17677 238 aa15.47■□□□□ 0.07
CDK5RAP3-237ENST00000585163 ICA1Q05084 483 aa15.47■□□□□ 0.07
CDK5RAP3-237ENST00000585163 TCP10Q12799 353 aa15.47■□□□□ 0.07
CDK5RAP3-237ENST00000585163 PTPROQ16827 1216 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms