RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 C1orf112Q9NSG2 853 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 TMEM260Q9NX78 707 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 MRPL42Q9Y6G3 142 aaKnown RBP17.06■□□□□ 0.32
VAPA-209ENST00000585042 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 IGLV3-22A0A075B6J6 115 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 FAM86B1E9PN63 330 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 GPR182O15218 404 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 CDC45O75419 566 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 FAM86B2P0C5J1 330 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 GNA11P29992 359 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
VAPA-209ENST00000585042 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
VAPA-209ENST00000585042 FGD1P98174 961 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 SETQ01105 290 aaPredicted RBP17.05■□□□□ 0.32
VAPA-209ENST00000585042 ZP2Q05996 745 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 TMEM62Q0P6H9 643 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 CAMK1Q14012 370 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 SWSAP1Q6NVH7 229 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 SMAP1Q8IYB5 467 aaPredicted RBP17.05■□□□□ 0.32
VAPA-209ENST00000585042 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
VAPA-209ENST00000585042 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 ERVK-5Q9HDB9 667 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 ALG13Q9NP73 1137 aaKnown RBP17.05■□□□□ 0.32
VAPA-209ENST00000585042 RGS18Q9NS28 235 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 PCDHB7Q9Y5E2 793 aa17.05■□□□□ 0.32
VAPA-209ENST00000585042 MAFBQ9Y5Q3 323 aaPredicted RBP17.05■□□□□ 0.32
VAPA-209ENST00000585042 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
VAPA-209ENST00000585042 DCXO43602 365 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 RPS6KA5O75582 802 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 ITGB1P05556 798 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 CRYBB1P53674 252 aaPredicted RBP17.04■□□□□ 0.32
VAPA-209ENST00000585042 UBE3AQ05086 875 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
VAPA-209ENST00000585042 SLC24A5Q71RS6 500 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 CCDC60Q8IWA6 550 aaPredicted RBP17.04■□□□□ 0.32
VAPA-209ENST00000585042 BICD2Q8TD16 824 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 ZNF577Q9BSK1 485 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 AAASQ9NRG9 546 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 LOXHD1Q8IVV2 1947 aa17.04■□□□□ 0.32
VAPA-209ENST00000585042 FSD2A1L4K1 749 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 ZBTB42B2RXF5 422 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 MAGEB2O15479 319 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 MBTPS2O43462 519 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 EYA4O95677 639 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 CIITAP33076 1130 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 SMAD4Q13485 552 aaKnown RBP17.03■□□□□ 0.32
VAPA-209ENST00000585042 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 JAKMIP3Q5VZ66 844 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 REXO1Q8N1G1 1221 aaKnown RBP17.03■□□□□ 0.32
VAPA-209ENST00000585042 EFHBQ8N7U6 833 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 KLHL23Q8NBE8 558 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 TCEAL9Q9UHQ7 104 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 CD207Q9UJ71 328 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 NOC2LQ9Y3T9 749 aaKnown RBP17.03■□□□□ 0.32
VAPA-209ENST00000585042 PCDHB12Q9Y5F1 795 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 PCDHA10Q9Y5I2 948 aa17.03■□□□□ 0.32
VAPA-209ENST00000585042 NID2Q14112 1375 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 DENND3A2RUS2 1198 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 FAM86C2PA6NEL3 165 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.32
VAPA-209ENST00000585042 PSAPP07602 524 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 ATP4AP20648 1035 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 FAM189BP81408 668 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 PKN1Q16512 942 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 PDE12Q6L8Q7 609 aaKnown RBP17.02■□□□□ 0.32
VAPA-209ENST00000585042 POF1BQ8WVV4 589 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 ADAM2Q99965 735 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 AGXT2Q9BYV1 514 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 KCNH6Q9H252 994 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 ELAC1Q9H777 363 aaKnown RBP17.02■□□□□ 0.32
VAPA-209ENST00000585042 CDHR5Q9HBB8 845 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 ST3GAL5Q9UNP4 418 aa17.02■□□□□ 0.32
VAPA-209ENST00000585042 C9IYK1 514 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 DNAJB1P25685 340 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
VAPA-209ENST00000585042 DLX2Q07687 328 aaPredicted RBP17.01■□□□□ 0.31
VAPA-209ENST00000585042 APOBRQ0VD83 1088 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 TMEM266Q2M3C6 531 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 Q6ZUG5 572 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 CKAP2LQ8IYA6 745 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 MSLNLQ96KJ4 702 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 FAM167AQ96KS9 214 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 IGFLR1Q9H665 355 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
VAPA-209ENST00000585042 ATG2AQ2TAZ0 1938 aa17.01■□□□□ 0.31
VAPA-209ENST00000585042 TBX10O75333 385 aa17■□□□□ 0.31
VAPA-209ENST00000585042 GPR32O75388 356 aa17■□□□□ 0.31
VAPA-209ENST00000585042 C22orf31O95567 290 aa17■□□□□ 0.31
VAPA-209ENST00000585042 PSMA5P28066 241 aa17■□□□□ 0.31
VAPA-209ENST00000585042 TMOD1P28289 359 aa17■□□□□ 0.31
VAPA-209ENST00000585042 HSPA4P34932 840 aa17■□□□□ 0.31
VAPA-209ENST00000585042 IRS1P35568 1242 aa17■□□□□ 0.31
VAPA-209ENST00000585042 USP11P51784 963 aa17■□□□□ 0.31
VAPA-209ENST00000585042 COASYQ13057 564 aa17■□□□□ 0.31
VAPA-209ENST00000585042 PAN2Q504Q3 1202 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms