RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 GABBR1Q9UBS5 961 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 CYP46A1Q9Y6A2 500 aa23.15■■□□□ 1.3
TOP3A-219ENST00000584887 MYH9P35579 1960 aaKnown RBP23.14■■□□□ 1.3
TOP3A-219ENST00000584887 H3BQ06 376 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-219ENST00000584887 GRM6O15303 877 aa23.14■■□□□ 1.29
TOP3A-219ENST00000584887 ATP4AP20648 1035 aa23.14■■□□□ 1.29
TOP3A-219ENST00000584887 TOB2Q14106 344 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-219ENST00000584887 SMAP1Q8IYB5 467 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-219ENST00000584887 ZNF689Q96CS4 500 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-219ENST00000584887 TMX1Q9H3N1 280 aa23.14■■□□□ 1.29
TOP3A-219ENST00000584887 PCDHA10Q9Y5I2 948 aa23.14■■□□□ 1.29
TOP3A-219ENST00000584887 MRPL42Q9Y6G3 142 aaKnown RBP23.14■■□□□ 1.29
TOP3A-219ENST00000584887 EVPLQ92817 2033 aa23.14■■□□□ 1.29
TOP3A-219ENST00000584887 ZBTB42B2RXF5 422 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 C5orf67F2Z3F1 127 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 CPLX1O14810 134 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 LINC00271P0C7V0 271 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 CIITAP33076 1130 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 GATMP50440 423 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 SSRP1Q08945 709 aaKnown RBP23.13■■□□□ 1.29
TOP3A-219ENST00000584887 PTCRAQ6ISU1 281 aaPredicted RBP23.13■■□□□ 1.29
TOP3A-219ENST00000584887 CMTR2Q8IYT2 770 aaKnown RBP23.13■■□□□ 1.29
TOP3A-219ENST00000584887 BBXQ8WY36 941 aaPredicted RBP23.13■■□□□ 1.29
TOP3A-219ENST00000584887 CLP1Q92989 425 aaKnown RBP23.13■■□□□ 1.29
TOP3A-219ENST00000584887 UPF3BQ9BZI7 483 aaKnown RBP23.13■■□□□ 1.29
TOP3A-219ENST00000584887 CDHR5Q9HBB8 845 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 ZSWIM6Q9HCJ5 1215 aa23.13■■□□□ 1.29
TOP3A-219ENST00000584887 NOC2LQ9Y3T9 749 aaKnown RBP23.13■■□□□ 1.29
TOP3A-219ENST00000584887 DENND3A2RUS2 1198 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 CHMP2AO43633 222 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 C22orf31O95567 290 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 NEFLP07196 543 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 STK3Q13188 491 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 KIZQ2M2Z5 673 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.12■■□□□ 1.29
TOP3A-219ENST00000584887 LENG9Q96B70 501 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 LMAN2LQ9H0V9 348 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 ERVK-5Q9HDB9 667 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 CLDND1Q9NY35 253 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 RAPGEFL1Q9UHV5 662 aa23.12■■□□□ 1.29
TOP3A-219ENST00000584887 MAFBQ9Y5Q3 323 aaPredicted RBP23.12■■□□□ 1.29
TOP3A-219ENST00000584887 WDR64B1ANS9 1081 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 GAS7O60861 476 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 VTNP04004 478 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 IL9P15248 144 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 EVCP57679 992 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 TMEM40Q8WWA1 233 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 PABPC5Q96DU9 382 aaKnown RBP23.11■■□□□ 1.29
TOP3A-219ENST00000584887 FAM167AQ96KS9 214 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 OSMRQ99650 979 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 C1QTNF1Q9BXJ1 281 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 EPHX3Q9H6B9 360 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 ALG13Q9NP73 1137 aaKnown RBP23.11■■□□□ 1.29
TOP3A-219ENST00000584887 SH3GLB2Q9NR46 395 aa23.11■■□□□ 1.29
TOP3A-219ENST00000584887 MSH4O15457 936 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 MGEA5O60502 916 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 SSTR3P32745 418 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-219ENST00000584887 SARSP49591 514 aaKnown RBP23.1■■□□□ 1.29
TOP3A-219ENST00000584887 CLCN3P51790 818 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 ODR4Q5SWX8 454 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 ADAM2Q99965 735 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 PLVAPQ9BX97 442 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 DISC1Q9NRI5 854 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 ST3GAL5Q9UNP4 418 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 CEP131Q9UPN4 1083 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 PCDHB7Q9Y5E2 793 aa23.1■■□□□ 1.29
TOP3A-219ENST00000584887 SPOUT1Q5T280 376 aaKnown RBP23.09■■□□□ 1.29
TOP3A-219ENST00000584887 LRCH2Q5VUJ6 765 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 CPLX2Q6PUV4 134 aaKnown RBP23.09■■□□□ 1.29
TOP3A-219ENST00000584887 NEK9Q8TD19 979 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 TBCKQ8TEA7 893 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 GJA10Q969M2 543 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 MAP7D2Q96T17 732 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 TEKT3Q9BXF9 490 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 IGFLR1Q9H665 355 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 CD320Q9NPF0 282 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 PCDHA4Q9UN74 947 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 AKT3Q9Y243 479 aa23.09■■□□□ 1.29
TOP3A-219ENST00000584887 GPR182O15218 404 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 DEXIO95424 95 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 OATP04181 439 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 USP11P51784 963 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 CRYBB1P53674 252 aaPredicted RBP23.08■■□□□ 1.29
TOP3A-219ENST00000584887 PRKCEQ02156 737 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 PUS10Q3MIT2 529 aaKnown RBP23.08■■□□□ 1.29
TOP3A-219ENST00000584887 CRIPAKQ8N1N5 446 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 LRRC71Q8N4P6 559 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 PDRG1Q9NUG6 133 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 PLAGL2Q9UPG8 496 aa23.08■■□□□ 1.29
TOP3A-219ENST00000584887 GRXCR2A6NFK2 248 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 TBKBP1A7MCY6 615 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 MAGEB2O15479 319 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 EPB41L2O43491 1005 aaKnown RBP23.07■■□□□ 1.28
TOP3A-219ENST00000584887 EDIL3O43854 480 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 MMP1P03956 469 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 HYAL1Q12794 435 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 CLUL1Q15846 466 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 UGCGQ16739 394 aa23.07■■□□□ 1.28
TOP3A-219ENST00000584887 EFCAB12Q6NXP0 572 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms