RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 COL20A1Q9P218 1284 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 FBXO40Q9UH90 709 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 IKBKBO14920 756 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 TLR3O15455 904 aaKnown RBP13.35□□□□□ -0.27
GGA3-217ENST00000583667 MAFGO15525 162 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 MARCH6O60337 910 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 MUTP22033 750 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 CDC25AP30304 524 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 ZNF76P36508 570 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 PTPN5P54829 565 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 CCL23P55773 120 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 RPS6P62753 249 aaKnown RBP13.35□□□□□ -0.27
GGA3-217ENST00000583667 AMPD3Q01432 767 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 KCNB1Q14721 858 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 TMEM119Q4V9L6 283 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 PRR16Q569H4 304 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 IER5LQ5T953 404 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
GGA3-217ENST00000583667 B3GNT9Q6UX72 402 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 RNF214Q8ND24 703 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 PNMA5Q96PV4 448 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 C7orf25Q9BPX7 421 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 LRRC27Q9C0I9 530 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 NT5C3AQ9H0P0 336 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
GGA3-217ENST00000583667 ACAD9Q9H845 621 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 MAN1B1Q9UKM7 699 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 RIPK3Q9Y572 518 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 UBIAD1Q9Y5Z9 338 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
GGA3-217ENST00000583667 BRWD1Q9NSI6 2320 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 A0A0U1RQG5 324 aaPredicted RBP13.34□□□□□ -0.27
GGA3-217ENST00000583667 PSMD10O75832 226 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 STAM2O75886 525 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 ASGR1P07306 291 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 FCER1AP12319 257 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 PLCG1P19174 1290 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 BMP6P22004 513 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
GGA3-217ENST00000583667 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 DPCR1Q3MIW9 517 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 C11orf57Q6ZUT1 292 aaPredicted RBP13.34□□□□□ -0.27
GGA3-217ENST00000583667 NCAPG2Q86XI2 1143 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 PLA2G4DQ86XP0 818 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
GGA3-217ENST00000583667 POLR3CQ9BUI4 534 aaPredicted RBP13.34□□□□□ -0.27
GGA3-217ENST00000583667 HIPK3Q9H422 1215 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 JADE2Q9NQC1 790 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 VAV3Q9UKW4 847 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 TRIOO75962 3097 aa13.34□□□□□ -0.27
GGA3-217ENST00000583667 GRXCR2A6NFK2 248 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 SMTNL1A8MU46 457 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 SLC25A27O95847 323 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 RPA1P27694 616 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 CST5P28325 142 aaPredicted RBP13.33□□□□□ -0.28
GGA3-217ENST00000583667 BAATQ14032 418 aaPredicted RBP13.33□□□□□ -0.28
GGA3-217ENST00000583667 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
GGA3-217ENST00000583667 SARM1Q6SZW1 724 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 ERMP1Q7Z2K6 904 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 VSIG10LQ86VR7 867 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 ERMNQ8TAM6 284 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 CYP2W1Q8TAV3 490 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
GGA3-217ENST00000583667 TAAR1Q96RJ0 339 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 IWS1Q96ST2 819 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 PDCD2LQ9BRP1 358 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 WDR11Q9BZH6 1224 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 PXMP2Q9NR77 195 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 CYP39A1Q9NYL5 469 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 LMCD1Q9NZU5 365 aa13.33□□□□□ -0.28
GGA3-217ENST00000583667 PGK2P07205 417 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 ITGB5P18084 799 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 KCNA5P22460 613 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 AFMP43652 599 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 MRPS9P82933 396 aaKnown RBP13.32□□□□□ -0.28
GGA3-217ENST00000583667 TCF15Q12870 199 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 TTLL4Q14679 1199 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 PGM5Q15124 567 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 ZNF792Q3KQV3 632 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 HAUS3Q68CZ6 603 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 SV2BQ7L1I2 683 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 SPRED2Q7Z698 418 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 DHX40Q8IX18 779 aaKnown RBP13.32□□□□□ -0.28
GGA3-217ENST00000583667 PCSK9Q8NBP7 692 aaKnown RBP13.32□□□□□ -0.28
GGA3-217ENST00000583667 DNERQ8NFT8 737 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
GGA3-217ENST00000583667 SNX29Q8TEQ0 813 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 LRRC15Q8TF66 581 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 WNT8AQ9H1J5 351 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 FAM184BQ9ULE4 1060 aa13.32□□□□□ -0.28
GGA3-217ENST00000583667 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms