RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 HNRNPH3P31942 346 aaKnown RBP24.94■■□□□ 1.58
CCDC47-204ENST00000582252 RBM10P98175 930 aaKnown RBP24.94■■□□□ 1.58
CCDC47-204ENST00000582252 WDR59Q6PJI9 974 aa24.94■■□□□ 1.58
CCDC47-204ENST00000582252 METTL14Q9HCE5 456 aaKnown RBP24.94■■□□□ 1.58
CCDC47-204ENST00000582252 ZNF215Q9UL58 517 aaPredicted RBP24.94■■□□□ 1.58
CCDC47-204ENST00000582252 ZNF214Q9UL59 606 aaPredicted RBP24.94■■□□□ 1.58
CCDC47-204ENST00000582252 MYH11P35749 1972 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 SLC16A3O15427 465 aaKnown RBP24.93■■□□□ 1.58
CCDC47-204ENST00000582252 DHX15O43143 795 aaKnown RBP24.93■■□□□ 1.58
CCDC47-204ENST00000582252 PRPF6O94906 941 aaKnown RBP24.93■■□□□ 1.58
CCDC47-204ENST00000582252 SFNP31947 248 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 JAK3P52333 1124 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 ZNF131P52739 623 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 LBX2Q6XYB7 198 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 NLRX1Q86UT6 975 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 BANK1Q8NDB2 785 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 TEX13BQ9BXU2 312 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 ASCC2Q9H1I8 757 aaPredicted RBP24.93■■□□□ 1.58
CCDC47-204ENST00000582252 DBR1Q9UK59 544 aaKnown RBP24.93■■□□□ 1.58
CCDC47-204ENST00000582252 SAMM50Q9Y512 469 aa24.93■■□□□ 1.58
CCDC47-204ENST00000582252 MAFGO15525 162 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 TOMM70O94826 608 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 OSBPP22059 807 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 NFIL3Q16649 462 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 GPAT2Q6NUI2 795 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 SAPCD2Q86UD0 394 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 RDM1Q8NG50 284 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 ANKRD7Q92527 254 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 TSC1Q92574 1164 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 MS4A4AQ96JQ5 239 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 FAM207AQ9NSI2 230 aaPredicted RBP24.92■■□□□ 1.58
CCDC47-204ENST00000582252 PKD2L1Q9P0L9 805 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 PNMA3Q9UL41 463 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 CCL15-CCL14A0A0B4J2E2 113 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 LYPLA2O95372 231 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 QARSP47897 775 aaKnown RBP24.92■■□□□ 1.58
CCDC47-204ENST00000582252 KRT76Q01546 638 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 ITGB3BPQ13352 177 aaPredicted RBP24.92■■□□□ 1.58
CCDC47-204ENST00000582252 TUBB2AQ13885 445 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 BAATQ14032 418 aaPredicted RBP24.92■■□□□ 1.58
CCDC47-204ENST00000582252 TMEM132BQ14DG7 1078 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 CCL15Q16663 113 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 CACNA2D4Q7Z3S7 1137 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 GPRASP2Q96D09 838 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 WDR24Q96S15 920 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 TUBB2BQ9BVA1 445 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 HAUS4Q9H6D7 363 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 ARMCX3Q9UH62 379 aaPredicted RBP24.92■■□□□ 1.58
CCDC47-204ENST00000582252 PLAGL2Q9UPG8 496 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 SLC45A1Q9Y2W3 748 aa24.92■■□□□ 1.58
CCDC47-204ENST00000582252 EIF3CLB5ME19 914 aaKnown RBP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 NKRFO15226 690 aaKnown RBP eCLIP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 EPB41P11171 864 aaKnown RBP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 NCBP1Q09161 790 aaKnown RBP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 ZNF662Q6ZS27 426 aa24.91■■□□□ 1.58
CCDC47-204ENST00000582252 FAM178BQ8IXR5 827 aa24.91■■□□□ 1.58
CCDC47-204ENST00000582252 CCDC43Q96MW1 224 aaKnown RBP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 EIF3CQ99613 913 aaKnown RBP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 TIPINQ9BVW5 301 aa24.91■■□□□ 1.58
CCDC47-204ENST00000582252 ACAD9Q9H845 621 aa24.91■■□□□ 1.58
CCDC47-204ENST00000582252 NHEJ1Q9H9Q4 299 aaPredicted RBP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 WRAP73Q9P2S5 460 aaPredicted RBP24.91■■□□□ 1.58
CCDC47-204ENST00000582252 PCDHB13Q9Y5F0 798 aa24.91■■□□□ 1.58
CCDC47-204ENST00000582252 RRP9O43818 475 aaKnown RBP24.9■■□□□ 1.58
CCDC47-204ENST00000582252 NR3C1P04150 777 aa24.9■■□□□ 1.58
CCDC47-204ENST00000582252 ZNF157P51786 506 aaPredicted RBP24.9■■□□□ 1.58
CCDC47-204ENST00000582252 HERVK_113P62684 666 aa24.9■■□□□ 1.58
CCDC47-204ENST00000582252 MNS1Q8NEH6 495 aa24.9■■□□□ 1.58
CCDC47-204ENST00000582252 NSUN6Q8TEA1 469 aaKnown RBP24.9■■□□□ 1.58
CCDC47-204ENST00000582252 CEP72Q9P209 647 aa24.9■■□□□ 1.58
CCDC47-204ENST00000582252 TESPA1A2RU30 521 aaPredicted RBP24.89■■□□□ 1.58
CCDC47-204ENST00000582252 WDR64B1ANS9 1081 aa24.89■■□□□ 1.58
CCDC47-204ENST00000582252 STAM2O75886 525 aa24.89■■□□□ 1.58
CCDC47-204ENST00000582252 MKRN3Q13064 507 aaKnown RBP24.89■■□□□ 1.58
CCDC47-204ENST00000582252 ALCAMQ13740 583 aa24.89■■□□□ 1.58
CCDC47-204ENST00000582252 GOLGA5Q8TBA6 731 aa24.89■■□□□ 1.58
CCDC47-204ENST00000582252 CCDC42Q96M95 316 aa24.89■■□□□ 1.58
CCDC47-204ENST00000582252 RIPK3Q9Y572 518 aa24.89■■□□□ 1.58
CCDC47-204ENST00000582252 ASTN1O14525 1302 aa24.89■■□□□ 1.58
CCDC47-204ENST00000582252 MAPTP10636 758 aaKnown RBP24.89■■□□□ 1.57
CCDC47-204ENST00000582252 HOXD13P35453 343 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 ZNF569Q5MCW4 686 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 RGMBQ6NW40 437 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 PADI6Q6TGC4 694 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 HS2ST1Q7LGA3 356 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 KIAA1328Q86T90 577 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 RASAL3Q86YV0 1011 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 EHBP1Q8NDI1 1231 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 GTF3C2Q8WUA4 911 aaPredicted RBP24.89■■□□□ 1.57
CCDC47-204ENST00000582252 BRI3BPQ8WY22 251 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 CDHR1Q96JP9 859 aa24.89■■□□□ 1.57
CCDC47-204ENST00000582252 ZBTB39O15060 712 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 NR3C2P08235 984 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 XRCC5P13010 732 aaKnown RBP24.88■■□□□ 1.57
CCDC47-204ENST00000582252 PLS1Q14651 629 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 SPA17Q15506 151 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 ODR4Q5SWX8 454 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 ANKRD23Q86SG2 305 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 VSIG10LQ86VR7 867 aa24.88■■□□□ 1.57
CCDC47-204ENST00000582252 C4orf19Q8IY42 314 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms