RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TOB1P50616 345 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 ZNF200P98182 395 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 ATP2C1P98194 919 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 TBC1D8BQ0IIM8 1120 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 MARCH8Q5T0T0 291 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 DHX38Q92620 1227 aaKnown RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 APBB2Q92870 758 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 CCDC43Q96MW1 224 aaKnown RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 HSD17B14Q9BPX1 270 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 EIF2AK1Q9BQI3 630 aaKnown RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 LXNQ9BS40 222 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 POLR3CQ9BUI4 534 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 TMEM60Q9H2L4 133 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 ANKEF1Q9NU02 776 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 SEPT9Q9UHD8 586 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-212ENST00000582122 PCDHB6Q9Y5E3 794 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 LTBP2Q14767 1821 aa11.67□□□□□ -0.54
TOP3A-212ENST00000582122 KDM3AQ9Y4C1 1321 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 ZNF862O60290 1169 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 C22orf31O95567 290 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 CXCL10P02778 98 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 ATP4AP20648 1035 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 RPA1P27694 616 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 YWHABP31946 246 aaKnown RBP11.66□□□□□ -0.54
TOP3A-212ENST00000582122 TECP42680 631 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 MRPS6P82932 125 aaKnown RBP11.66□□□□□ -0.54
TOP3A-212ENST00000582122 TARBP2Q15633 366 aaKnown RBP11.66□□□□□ -0.54
TOP3A-212ENST00000582122 TMEM240Q5SV17 173 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 KRT79Q5XKE5 535 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 ATL3Q6DD88 541 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 CNKSR3Q6P9H4 555 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 TPH2Q8IWU9 490 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 C4orf32Q8N8J7 132 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 TCP11Q8WWU5 503 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 SLC7A3Q8WY07 619 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 HERVK_113Q902F9 699 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 GJA10Q969M2 543 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
TOP3A-212ENST00000582122 AK8Q96MA6 479 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 NACC1Q96RE7 527 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-212ENST00000582122 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 MTMR6Q9Y217 621 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-212ENST00000582122 TRIP12Q14669 1992 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-212ENST00000582122 DNAH12Q6ZR08 3092 aa11.66□□□□□ -0.54
TOP3A-212ENST00000582122 ABHD14A-ACY1A0A1B0GW23 586 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 ZBTB42B2RXF5 422 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 SLITRK3O94933 977 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 IKBKEQ14164 716 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 HIC1Q14526 733 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 UGCGQ16739 394 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 METTL13Q8N6R0 699 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 IGSF22Q8N9C0 903 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 PHOSPHO2Q8TCD6 241 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 PPP1R13LQ8WUF5 828 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 DNAJB3Q8WWF6 145 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 SEPT8Q92599 483 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 SCLYQ96I15 445 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 DYDC2Q96IM9 177 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 CEP170P1Q96L14 293 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 ZNF396Q96N95 335 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-212ENST00000582122 NT5C3AQ9H0P0 336 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 CYP26B1Q9NR63 512 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-212ENST00000582122 TRPV2Q9Y5S1 764 aa11.65□□□□□ -0.54
TOP3A-212ENST00000582122 UMODL1Q5DID0 1318 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 POTEMA6NI47 508 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 WNT7AO00755 349 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 ASAP2O43150 1006 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 MAFO75444 373 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 DGAT1O75907 488 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 LONP1P36776 959 aaKnown RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 CRYBB1P53674 252 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 POLGP54098 1239 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 RESTQ13127 1097 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 SHHQ15465 462 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 MTERF2Q49AM1 385 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 PLEKHG4Q58EX7 1191 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 RUFY4Q6ZNE9 571 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 TRMT1LQ7Z2T5 733 aaKnown RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 DEFB128Q7Z7B8 93 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 FERMT3Q86UX7 667 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 KIAA0319LQ8IZA0 1049 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 FAM161BQ96MY7 647 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.556e-6■■■□□ 15.1
TOP3A-212ENST00000582122 FTHL17Q9BXU8 183 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 CELF4Q9BZC1 486 aaKnown RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 FAM49AQ9H0Q0 323 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 RGL1Q9NZL6 768 aa11.64□□□□□ -0.55
TOP3A-212ENST00000582122 DBR1Q9UK59 544 aaKnown RBP11.64□□□□□ -0.55
TOP3A-212ENST00000582122 ATP6V1DQ9Y5K8 247 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms