RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MAMDC2Q7Z304 686 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 FILIP1Q7Z7B0 1213 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 ADGRE4PQ86SQ3 457 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 LRRC47Q8N1G4 583 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 ZNF669Q96BR6 464 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 SMURF1Q9HCE7 757 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 CDC42EP3Q9UKI2 254 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 A0A0G2JNJ9 132 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 ADCY3O60266 1144 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 PYGMP11217 842 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 MAKP20794 623 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 JAM2P57087 298 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 ARID5AQ03989 594 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 GRM7Q14831 915 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 C16orf59Q7L2K0 433 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 OSTM1Q86WC4 334 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 BCL6BQ8N143 479 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 FBXW5Q969U6 566 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 GMLQ99445 158 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 Q9UFV3 132 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 DMRT1Q9Y5R6 373 aa5.68□□□□□ -1.5
SMCHD1-206ENST00000581631 AQP7O14520 342 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 SLC26A4O43511 780 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 MAFO75444 373 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 PEX11BO96011 259 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 ECE1P42892 770 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 GNL2Q13823 731 aaKnown RBP5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 TM4SF20Q53R12 229 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 MRGPRGQ86SM5 289 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 ULK2Q8IYT8 1036 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 OR14K1Q8NGZ2 314 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 OR10A5Q9H207 317 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 GIT1Q9Y2X7 761 aa5.67□□□□□ -1.5
SMCHD1-206ENST00000581631 LACTBP83111 547 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 MOGSQ13724 837 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 SAFB2Q14151 953 aaKnown RBP eCLIP5.66□□□□□ -1.52e-6■■□□□ 12.6
SMCHD1-206ENST00000581631 FSTL4Q6MZW2 842 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 NOSTRINQ8IVI9 506 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 SHCBP1Q8NEM2 672 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 PTPRN2Q92932 1015 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 CLIP3Q96DZ5 547 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 PCDHA8Q9Y5H6 950 aa5.66□□□□□ -1.5
SMCHD1-206ENST00000581631 PRAMEF25A6NGN4 478 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 ST5P78524 1137 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 SLC25A3Q00325 362 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 HNRNPA0Q13151 305 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 RAB33AQ14088 237 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 RRP1BQ14684 758 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 FOXB2Q5VYV0 432 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 OTOP2Q7RTS6 562 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 MTDHQ86UE4 582 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 DNAJC10Q8IXB1 793 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 D2HGDHQ8N465 521 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 PRRX2Q99811 253 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 CATSPERZQ9NTU4 200 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 UCKL1Q9NWZ5 548 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 R3HCC1Q9Y3T6 440 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 CTDP1Q9Y5B0 961 aaPredicted RBP5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 TNFRSF18Q9Y5U5 241 aa5.65□□□□□ -1.5
SMCHD1-206ENST00000581631 RASSF10A6NK89 507 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 CAPN14A8MX76 684 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 KCNK3O14649 394 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 MMEP08473 750 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 KRT15P19012 456 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 STAT5BP51692 787 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 ADAM8P78325 824 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 RIN1Q13671 783 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 GRAMD4Q6IC98 578 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 SPATC1Q76KD6 591 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 SGMS1Q86VZ5 419 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 SCUBE1Q8IWY4 988 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 SLC43A3Q8NBI5 491 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 ASB15Q8WXK1 588 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 MPHOSPH9Q99550 1183 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 SLC2A4RGQ9NR83 387 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 GPRC5BQ9NZH0 403 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 SH3BP1Q9Y3L3 701 aa5.64□□□□□ -1.51
SMCHD1-206ENST00000581631 MEOX1P50221 254 aa5.63□□□□□ -1.51
SMCHD1-206ENST00000581631 RTKN2Q8IZC4 609 aa5.63□□□□□ -1.51
SMCHD1-206ENST00000581631 THEMISQ8N1K5 641 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-206ENST00000581631 RABGGTAQ92696 567 aa5.63□□□□□ -1.51
SMCHD1-206ENST00000581631 TMEM176AQ96HP8 235 aa5.63□□□□□ -1.51
SMCHD1-206ENST00000581631 PARPBPQ9NWS1 579 aa5.63□□□□□ -1.51
SMCHD1-206ENST00000581631 CCDC66A2RUB6 948 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 FOXN1O15353 648 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 CYP27B1O15528 508 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 SUMO1P63165 101 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 HHEXQ03014 270 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 CRY1Q16526 586 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 FAM209AQ5JX71 171 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 RPUSD2Q8IZ73 545 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 DLG3Q92796 817 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 ZG16BQ96DA0 208 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 EXOC2Q96KP1 924 aa5.62□□□□□ -1.51
SMCHD1-206ENST00000581631 TRBV23-1A0A0A0MS06 115 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 SRGAP2CP0DJJ0 459 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 TCF3P15923 654 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 SDHAP31040 664 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms